Parasynechococcus marenigrum: SYNW2049
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Entry
SYNW2049 CDS
T00144
Symbol
recF
Name
(GenBank) putative DNA repair and genetic recombination protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
syw
Parasynechococcus marenigrum
Pathway
syw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SYNW2049 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syw03400
]
SYNW2049 (recF)
DNA repair and recombination proteins [BR:
syw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SYNW2049 (recF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
DUF2813
AAA_29
ABC_tran
AAA_27
Motif
Other DBs
NCBI-ProteinID:
CAE08564
UniProt:
Q7U4L8
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All DBs
Position
1946881..1947978
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AA seq
365 aa
AA seq
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MQGFRNHRKLSLELTQPRLLVIGPNGIGKSNLLEAVELLGSLRSHRCSQDRDLIQWEAPR
ALLRAGLDDGDQLELELRRQGGRQARRNGKTLDRQLDLIGPLRCIGFSALDLELVRGEPA
LRRQWLDRVVLQLEPVYADLLGRYNRLLRQRSQLWRRGAQTNPNQRDALLDAFDVQMALV
STRIHRRRQRALRRLEPIARRWQSHLSAGSEELELHYQPGSRLDAEEAEEPWRLAIEEQL
RLQRPEEERLGSCRVGPHRDEVSLQLGGTPARRFGSSGQQRSLVLGLKLAELELVTQLFG
EAPLLLLDDVLAELDPTRQHLLLEAVGQEHQCLVSATHLSGFEGGWREHSQILKPGDLSP
GVEIG
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
ctgcaggggtttcggaaccacaggaagctgtcgctggagctgacccagccgcggttgctg
gtgatcggccccaacggcatcggcaaatcaaatctgctggaggccgtggagctgctgggc
agcctgcgctcgcatcgctgcagccaggaccgtgacctgatccagtgggaggcaccgcgg
gccctgctgcgggccggcctggatgatggcgatcagctggagctggagctgcgtcgccaa
ggggggcgccaggcccgtcgcaacggcaagaccctggatcgccaattggatctgatcggt
ccgctgcgctgcatcggtttcagcgccctcgatctggagttggtgcggggagaaccggcc
ctgcggcggcagtggctcgaccgcgtggtgctgcagctggagcccgtctatgccgatctg
ctcggccgctacaaccgcctgctgcgccaacgcagccagctctggcgtcgtggtgcgcag
accaacccgaaccagcgggacgccttgctcgatgccttcgatgtgcagatggccctggtg
agcacgcgcattcaccgccgccgccaacgggcgttgcggcgcctggaaccgatcgcgcgc
cgctggcagtcgcacctcagtgccgggagcgaggagctggaattgcactaccaaccgggc
agtcgcctcgatgccgaggaagcggaggagccatggcgactggccatcgaagagcagctg
cggctgcaacggccggaggaggaacggttgggcagctgccgggtggggccccatcgcgat
gaagtgtccctgcaactggggggaacaccggcgcggcggttcggatcatcgggccagcaa
cgctcgctggtgctggggctgaaactggcggaactggaactggtgacccagctgttcggc
gaggcgccgctgctgctgctggacgatgtgctggcggaactcgaccccacccgtcagcac
ctgctgctggaggcggtggggcaggagcatcaatgcctggtgagcgccacccacctgagc
ggctttgagggcggctggcgggagcattcgcagattctcaaacctggagacctgagtcca
ggggtggagatcggataa
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