Parasynechococcus marenigrum: SYNW2245
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Entry
SYNW2245 CDS
T00144
Symbol
radA
Name
(GenBank) putative DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
syw
Parasynechococcus marenigrum
Brite
KEGG Orthology (KO) [BR:
syw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syw03400
]
SYNW2245 (radA)
DNA repair and recombination proteins [BR:
syw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SYNW2245 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_22
AAA_16
AAA
GvpD_P-loop
DUF7125
AAA_14
Lon_C
AAA_5
DUF7129
Rad51
Zn_ribbon_NrdR
nSTAND3
Elong_Iki1
NACHT
ATPase_2
PAXNEB
KdpD
HypA
AAA_24
MCM
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
CAE08760
UniProt:
Q7U430
LinkDB
All DBs
Position
complement(2144865..2146259)
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AA seq
464 aa
AA seq
DB search
MPKSAVVFHCQVCGAQSRQFFGRCPECGSWNSLVEQSQPANDGGRRRRAPDADRPSTPKR
STAMASLEDQPIRRLPTGSGEFDRVLGGGLVPGSLVLVGGDPGIGKSTLLLQSASTMAAQ
TSVLYVSAEESAQQVKLRWQRLAGGPSDLQLLAETDLELVLEELEALRPAVAIIDSIQAL
HDANLPSAPGSVGQVRECAAALQRLAKRQTTALLLVGHVTKEGMLAGPKVLEHLVDAVLT
FEGDRFASHRLLRAVKNRFGATHELGLFEMQAQGLEEVSNPSELFLSETRASGVATIVAC
EGSRSLVVDLQALVNVTSYASPRRTATGIGTNRLHQILAVLEKHMGLPLSRFDCYLAVAG
GLEVEEPAADLGVAAAVVASFRDLTLPPGTVLVGELGLGGQLRPVGQLELRLQEAARLGF
RRAVVPRGSGLGALASGLDLALLEADGVTEALVLALGEDVTDQK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
gtgcctaaatccgccgttgtgttccattgccaggtctgtggagcccagtcacgacagttc
tttgggcgctgcccggagtgcggcagctggaattccctcgtcgagcagtcccagcccgcc
aatgacggcggccgtcgtcgccgtgcgcccgatgcagaccgaccatcgacgccgaaacgc
tccacagccatggcctcgctggaggatcagccgatccggcgattgccaacgggttccggt
gaatttgatcgggtgctgggtggcgggctggtgccgggctccctggtgctggtgggggga
gatccgggcatcggtaagagcaccctgctgctgcagagcgcgtcgacgatggctgctcaa
acctcagtgctgtatgtgagtgctgaggagtcggcccagcaggtgaagctgcgttggcag
cgcctggcgggtggcccctctgatctgcagctgctggcggaaaccgacctcgagctggtg
ctggaggagctggaggccctgcgtcctgccgtggcgatcatcgacagcatccaggcactt
cacgacgccaacctccccagtgctcccggctcggttggtcaggtgcgggaatgtgccgcc
gccttgcaacggctggccaaacgccagaccacagccctgttgttggtgggccacgtgacc
aaggagggaatgttggctggacccaaggtgctggaacacctggtggacgcggtgctcacc
ttcgaaggggaccgctttgccagtcaccggctgttgcgggccgtgaaaaaccgtttcgga
gccacccatgaactgggactgttcgagatgcaggcccagggcctggaggaggtgagcaat
cccagcgagttgttcctgagtgaaacccgtgcctcgggtgtcgccacgatcgtggcctgt
gagggatcacgttcgctggtggtggacctgcaggccctggtcaatgtcaccagctatgcc
agccctcgacgcacggccacgggcatcggcaccaaccggcttcaccagatcctggcggtg
ctggaaaagcacatggggttacccctctcccgctttgactgttacctggccgtggccggt
gggctggaggtggaggagccggcggcggatcttggggtggcggctgcggtggtggccagt
tttcgcgatctcaccctcccgccggggacggtgctggtcggcgagctcggtctggggggg
cagctcagaccggtcggtcagctggagttacgcctgcaggaggcagcgcggctcggattc
cggcgggcggtggtgccccgtggcagtggactaggtgccttggccagtggtcttgatctt
gccctcctggaggccgatggggtcaccgaggccctggtgctggccctcggtgaggacgtg
acggaccagaagtag
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