Synechococcus sp. WH 7803: SynWH7803_0082
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Entry
SynWH7803_0082 CDS
T00524
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
syx
Synechococcus sp. WH 7803
Pathway
syx03030
DNA replication
syx03430
Mismatch repair
syx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SynWH7803_0082 (holA)
03430 Mismatch repair
SynWH7803_0082 (holA)
03440 Homologous recombination
SynWH7803_0082 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syx03032
]
SynWH7803_0082 (holA)
03400 DNA repair and recombination proteins [BR:
syx03400
]
SynWH7803_0082 (holA)
Enzymes [BR:
syx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SynWH7803_0082 (holA)
DNA replication proteins [BR:
syx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SynWH7803_0082 (holA)
DNA repair and recombination proteins [BR:
syx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SynWH7803_0082 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
CAK22508
CyanoBase:
SynWH7803_0082
UniProt:
A5GHU3
LinkDB
All DBs
Position
complement(84625..85605)
Genome browser
AA seq
326 aa
AA seq
DB search
MPIQLLWGDDSAALERAIQAVIDSALDPAWASVNLSRLDGSDSGQARQALEEARTPPFGS
GARVVLLQRSPFCNGCPSELADRFEASIDTIPDSTELLLCNPNKPDGRLRTTKALQKRVK
AGQAKELSFKLPAVWDGAGQRQLVERTASELKLSLEPKAVDALIDAIGSDSARLSMELQK
LALHAESTGSPHISATAVQSLIDGLSTNALQVGDALLAGDPGEAIALLDALLDGGEPALR
IVATLTGQIRGWLWVLLLEQQGERDVAVIAKAAGIGNPKRIYVMRKQLQGRSPERCLNLL
GRLLDVEAALKRGAQPGDAFRDGLLG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgccgatccagttgctgtggggcgatgattccgcggcgctggagcgggccattcaggcc
gtgatcgacagcgcgctcgatccggcctgggcgagcgtgaatctgagccgactggatggc
agcgacagcgggcaggcccggcaagccctggaagaggcgcgcacgcccccattcggcagc
ggagcgcgggtggtgctgctgcagcgctcacctttctgtaatggctgccccagtgagctg
gccgatcgctttgaagcctccatcgacaccattcccgacagcaccgagctgctgctctgc
aaccccaacaaacccgatggccggctgcgcaccaccaaggccctgcagaaacgggtgaag
gcagggcaggccaaagagctgagcttcaagctgccggcggtgtgggacggcgccgggcag
cgccagttggtggagcgcaccgccagcgagctcaagctgagcctggagcccaaggcggtg
gacgccctgatcgatgccattggcagcgacagcgcccggttgagcatggaactgcagaaa
ctggccctgcatgccgaaagcacgggcagcccacacatcagtgccacggcggtgcagagc
ctgatcgatgggctcagcaccaatgccctgcaggtgggcgatgccctgctcgccggcgac
cccggagaagcgatcgccctgctcgatgccctgctcgatggcggcgaaccggccctacgc
atcgtggccaccctcaccggacagatccgcggctggctctgggtgctgctgctcgagcag
cagggggaacgggatgtggccgtgatcgccaaggctgccggcatcggcaaccccaagcgc
atctacgtgatgcgcaaacaactgcagggccgcagcccggagcgctgcctcaacctgctc
ggccggctgctggatgtggaagcagcgctcaaacgcggtgcccagcccggcgatgccttc
cgtgacggcctgctgggataa
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