Synechococcus sp. WH 7803: SynWH7803_0465
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Entry
SynWH7803_0465 CDS
T00524
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
syx
Synechococcus sp. WH 7803
Brite
KEGG Orthology (KO) [BR:
syx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syx03016
]
SynWH7803_0465 (rnd)
Enzymes [BR:
syx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SynWH7803_0465 (rnd)
Transfer RNA biogenesis [BR:
syx03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SynWH7803_0465 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Ku
Motif
Other DBs
NCBI-ProteinID:
CAK22891
UniProt:
A5GIX6
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All DBs
Position
478418..479062
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AA seq
214 aa
AA seq
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MAEIPSEPHAFVVLDGDLNAEWSERFAASTALAVDTEAMGLIHGRDRLCLVQICDDKDQV
ACIRIALGQSEAPRLKALMEAATIEKVFHFARFDVAALATGLGIRVNPIFCTKVGSRLAR
TYTPRHGLKDLVMELVGVELDKQAQSSDWGRVDELTDVQLAYAANDARYLLPARRQLEVM
LRREGRWELAQSCFQCIPVMSDLDRFRFVNTFEH
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggctgagatccccagcgagccccatgccttcgttgttctcgatggcgatctcaatgcg
gagtggtcggagcgctttgccgcgtcgacagcgctggctgtggataccgaggccatgggc
ctgatccatggtcgcgaccggctttgtctcgttcagatctgtgatgacaaagaccaggtg
gcttgcatacggattgctctagggcagtcggaagccccccgtctcaaagcgttgatggaa
gccgcgacgatcgagaaggtgtttcatttcgcccggttcgatgtcgcggccctggccacc
gggctgggaatcagggtgaatccaatcttttgcacgaaggtcggcagccgtctggctcgc
acctacaccccgcgccacggtctgaaggatttggtgatggagctggtgggggtcgagctc
gataagcaggcgcaaagcagcgattggggacgggtggatgaactcacggatgttcaattg
gcctatgcagccaacgatgcccgttatctgctccccgcccggcggcagttagaggtcatg
ttgcgccgcgaaggacgctgggagctggctcaaagctgcttccagtgcattcctgtgatg
tcggatctcgatcgcttccgttttgtgaacaccttcgagcactga
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