Synechococcus sp. WH 7803: SynWH7803_1883
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Entry
SynWH7803_1883 CDS
T00524
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
syx
Synechococcus sp. WH 7803
Brite
KEGG Orthology (KO) [BR:
syx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syx03032
]
SynWH7803_1883 (topA)
03400 DNA repair and recombination proteins [BR:
syx03400
]
SynWH7803_1883 (topA)
Enzymes [BR:
syx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SynWH7803_1883 (topA)
DNA replication proteins [BR:
syx03032
]
Prokaryotic type
DNA Topoisomerases
SynWH7803_1883 (topA)
DNA repair and recombination proteins [BR:
syx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SynWH7803_1883 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
MAJIN
Toprim_4
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
CAK24309
UniProt:
A5GMZ4
LinkDB
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Position
complement(1723656..1726373)
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AA seq
905 aa
AA seq
DB search
MAHTLVIVESPTKARTIRGFLPKAFRVEASMGHVRDLPNNASEIPAAHKGQKWANLGVNT
EADFEPLYVVPKDKKKIVRELKDALKGADQLLLATDEDREGESISWHLLQLLAPKVPVKR
MVFHEITKEAIGRALDQTRELDMELVHAQETRRILDRLVGYTLSPLLWKKVAWGLSAGRV
QSVAVRLLVQRERARRAFRSGSYWDLKAALEKAGTRFEAKLTHLEGQRIATGNDFDESTG
GLKEGSKVRLLSEEEARKLSAAVEAADWSVTAVEEKPTVRRPVPPFTTSTLQQESNRKLR
LSARETMRCAQGLYERGFITYMRTDSVHLSDQAISAARSCVESRYGKEYLSKSVRQFSTK
SRNAQEAHEAIRPAGESFRAPQETGLDGRDLALYELIWKRTVASQMAEARLTMLSVDLNA
ADAVFKASGKRIDFPGFFRAYVEGSDDPDAALEGQEVLLPSLSVGDAPSLKEVEALGHQT
QPPARFSEASLVKMLEKEGIGRPSTYASIIGTIVDRGYATLLNNSLTPSFTAFAVTSLLE
EHFPDLVDPGFTARMENTLDEISHGTVQWLPYLEGFYKGDQGLESQVHQREGDIDPGASR
TIDLEGLPCVVRIGRFGAYLESKRVGDDGEEELIKATLPREITPADLDADQAELILKQKA
DGPEALGEDPETGDLVYLLFGQYGPYVQRGQVSDENPKPKRASLPKGVKPEDLNLDDALG
LLRLPRLLGEHPDGGKVQAGLGRFGPYVVWDKGKGEKDYRSLKGDDDVLAVGLTRALELL
AMPKRGRGGRTALKDLGKPEGSEETIQVYDGPYGLYVKQGKVNASLPEGKGADDITLEEA
VELLAAKASTKKSSSRKSAAAKKPAAKKPAAKKPAAKPAAKKPPATTKSGRLRASAVRVI
RPADS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcacaccctggtcatcgttgagagccctaccaaggcccgcaccatccgtggattc
ctgcccaaggccttccgggtggaggcgtccatgggccatgtgcgtgaccttccgaacaac
gccagcgagattccggcggctcataaagggcagaaatgggccaatctcggtgtcaacacc
gaagccgacttcgagccgctctacgtggtgccgaaggacaagaagaagattgttcgggag
ctcaaggatgcgctgaagggagcggatcagcttctgctggcgacggacgaagaccgcgaa
ggcgaaagcatcagttggcatctcctgcagcttctggcccccaaggtgcctgtgaaacgg
atggtgtttcacgagatcaccaaggaggcgatcgggcgcgctcttgatcagacccgggag
ctcgatatggagctcgtgcatgcccaggagacccgtcgcatcctcgaccgattggtgggc
tacaccctgtcgccactgctgtggaagaaggtggcctgggggttgtccgcgggccgcgtt
cagtcggtggctgtgcgcttgctggtgcaacgggaacgggcccgaagggcgttccgaagc
ggcagttactgggacctcaaggccgcgcttgagaaagctggcacgcgttttgaagccaag
ctcacccacctcgaggggcagcgcattgccactggcaatgatttcgacgagagcaccggt
ggtctgaaagaaggcagcaaggtgcggttgctcagcgaggaggaagcccgcaagctgtcc
gccgctgttgaggccgcggactggagcgtgacggccgtggaggagaaacccacggtgcgt
cgcccagtgccgcccttcaccaccagcacccttcaacaggaatcaaaccggaagctgcgg
ttgtcggcgcgggagacgatgcgctgcgctcaagggctctatgagcggggcttcatcacc
tacatgcgaacggattcggtgcatctgtcggatcaggccatcagcgcagcacgcagctgt
gtggaatcccgctacggcaaggagtacctcagcaagtcggtgcgccagttcagcaccaag
tcccgcaatgcccaggaagcccatgaagcgatccgccccgccggcgagagtttccgggct
ccccaggagacgggcctggacgggcgggatctggccctgtatgagctgatctggaagcgc
accgtggccagtcagatggctgaggcgcgtttgaccatgctctcggtggatctcaacgct
gccgacgccgtgttcaaggccagcggcaagcgcatcgatttcccgggatttttccgtgcc
tatgtggagggcagtgatgatcctgatgcggccctggaaggccaggaagtgctgctcccc
tcgctgagtgttggcgacgcaccatccctgaaggaggtggaagctctcggccaccagacc
cagccaccagcgcggttcagcgaagcgtctctggtgaagatgttggagaaggaaggcatc
ggccggccctccacctatgcctcgatcatcggcacgatcgtggaccgtggatacgccacc
ctgctgaacaattccctcaccccgagcttcaccgccttcgcggtgacatcgttgcttgag
gagcatttccctgatctggtggatccggggttcacggcccggatggagaacaccctcgac
gagatctcccatggaaccgtgcaatggcttccctatctcgaggggttttacaaaggtgac
caagggcttgaatcccaggttcatcaacgggaaggggatatcgatcccggtgcctcccgc
accattgatctcgaaggcctgccgtgcgtggtgcggattggtcgtttcggtgcctatctg
gagtcgaaacgcgtcggagacgatggcgaggaggaactgatcaaggccacgctgccgagg
gaaatcacccccgcggatctcgatgccgaccaggcggaattgatcctcaagcagaaggcc
gatggccctgaagcgttgggcgaagatcccgaaaccggcgacctggtgtatttgctgttc
gggcagtacggcccttacgtgcaacgcgggcaggtgagtgatgagaacccgaagcccaag
cgagcgtcgctgcccaaaggggtgaaacctgaggacctcaacctcgacgacgcgcttggc
ttgctgcgtctgccgcgtttgcttggcgagcaccctgatggtggcaaggttcaggcaggc
ctcggtcgtttcggtccctacgtggtgtgggacaagggcaaaggcgaaaaggactaccga
tcgctgaaaggggatgacgatgtgctggccgttggcctgacccgtgcccttgagctgctg
gcgatgcccaagcgtggccgcggcggtcgcacagccctcaaggacttggggaaaccggag
ggaagcgaggagaccattcaggtgtacgacggcccttacggcttgtacgtgaagcagggc
aaggtcaatgcttcgctgcctgaaggcaagggtgcggacgacatcaccctcgaggaagca
gtcgagctgctggccgcgaaggcctcaacgaaaaaatccagcagtcgcaaatccgcggct
gccaaaaagccggcggcgaagaaacctgccgccaaaaaaccagcggcgaaaccagcggcg
aaaaagcccccggccaccaccaagtcgggacggctccgggcgagtgcggtgcgggtgatc
cggcccgctgattcctga
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