Synechococcus sp. WH 7803: SynWH7803_1971
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Entry
SynWH7803_1971 CDS
T00524
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
syx
Synechococcus sp. WH 7803
Brite
KEGG Orthology (KO) [BR:
syx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syx03016
]
SynWH7803_1971 (truB)
Enzymes [BR:
syx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SynWH7803_1971 (truB)
Transfer RNA biogenesis [BR:
syx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SynWH7803_1971 (truB)
Prokaryotic type
SynWH7803_1971 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
UPF0113
Motif
Other DBs
NCBI-ProteinID:
CAK24397
UniProt:
A5GN82
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All DBs
Position
1801916..1802818
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AA seq
300 aa
AA seq
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MTAPLGFAVIDKPAGLTSHACVARIRRLLGIRRVGHGGTLDPAVTGVLPIAVGQATRLLP
YLPGDKTYRGVIQLGITTNTDDLEGEISSRQPLPALSSAELEQALAPFRGLIQQRPPQVS
AVHVDGERAHARARRGEQMDLPERAITIHHLHLLNWCPEQGQLRVEVHCSAGTYIRSLAR
DLGQNLGCGGCLASLRRTQALGFQDAQAIPLPERPEPGATATDPPALPLLPPQDALAHLP
QRRLSAREQEDWSCGRRITPGADQESDAVVVLSEGGRMLGLGVPDGTGGLQPKVVFEARG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttgactgcgccccttggctttgccgtgatcgacaagccggctggcctcacctcccacgcc
tgcgtcgctcggatccggcgcctgctcggcatccgacgggtcggccatggcggcaccctg
gatccagcggtgacaggagttctgccgatcgccgtcgggcaggcgacccgcttgctgccc
tatctccccggcgacaagacctaccggggagtgatccagctgggcatcaccaccaacact
gatgaccttgagggagagatcagctcacgccagcccttgccggccctgagcagcgccgag
ctggagcaggcgcttgccccattccgcggcctcatccaacagcgcccgccgcaggtctca
gccgttcatgtggatggcgaacgcgcccatgccagagcgcggcgcggtgaacagatggat
ctgccggagcgcgccatcacgattcaccacctgcacctcctcaattggtgcccggaacag
gggcaattgcgcgttgaagtgcactgttcagcaggcacttacatccgttcgctggccaga
gatctgggccagaacctgggctgtgggggctgcctggccagcctgcgccgcacccaggcc
cttgggtttcaagacgcgcaggcgatccccctgccagagcggccggagccgggggccacc
gcgacagatccaccggcgctgcctctgcttcctccgcaggacgccctcgcgcacctcccg
cagcggcgcctgtccgcccgtgagcaggaggactggagctgcggacggcggatcacccca
ggagccgaccaggagagcgacgcggtggtggtgctcagcgagggagggcgcatgctcggc
ctgggcgtgccggatgggacgggtgggctgcaaccaaaagtcgtgttcgaagcccgaggc
tga
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