Synechococcus sp. WH 7803: SynWH7803_2040
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Entry
SynWH7803_2040 CDS
T00524
Name
(GenBank) Superfamily II RNA helicase
Organism
syx
Synechococcus sp. WH 7803
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Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
Ski2_cyano_M
ResIII
Helicase_C
DEXQc_Suv3
nSTAND3
AAA_22
nSTAND_NTPase5
IstB_IS21
AAA_30
CCDC89
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
CAK24466
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Position
complement(1863961..1866735)
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AA seq
924 aa
AA seq
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MKDQDPQAARPASEGSPDPAQLFPFQLDDFQLEAIDALNQGHSVVVSAPTGSGKTLVGEY
AIYRAIAHGLKVFYTTPLKALSNQKLRDFREQFGADNVGLMTGDLSVNREASIVVMTTEI
FRNMLYAEADQSDDPLAGVEAVVLDECHYMNDSQRGTVWEESIIHCPPPVQLVALSATVA
NAGQLTDWIERVHGPTRLVVSDFRPVPLQFSFCSAKGLHPLLNDQGTGLHPNCKVWRAPK
GNKRKGRSQRPPQPEPPPISFVVAQMAAREMLPAIYFIFSRRGCDKAVRDLGVQCLVSES
EQARIRERLKAYTEANPEAVRDGLHADALLRGIAAHHAGVLPAWKELIEELFQQGLVKVV
FATETLAAGINMPARSTVISSLSKRTERGHRPLMASEFLQMAGRAGRRGLDSKGYVVTVQ
SRFEGVREAGQLATSPSDPLVSQFTPSYGMVLNLLQRHDLAKARELVERSFGRYLASLDL
VEEEEILQQLRLQLGQLQGTAGDVPWEDFEDYEKLRGRLREERRLLRILQQQAEETLAHE
LTLALQFASVGTLVSLKAPQLRGGVTPAVIVEKCEGPGQFPLLLCLTSDNVWLMLPCQAV
VSLHAELSCLQVDGLQAPELGRAGELRHGDQHSGGLALAVGHMAQRHDMTTPQYDLAGEV
LSQMQTVKELEAELEAHPAHRWGDRKQLKKHRRRMEELELEITERQQLLHHRANRHWDTF
LSLMEILQHFGALDDLVPTEIGRTVAALRGDNELWLGLALMSGHLDDLPPAELAAVFEAI
STEVNRPDLWSGFPPPPRAEEALHDLSGLRRELLRAQERHQVVVPAWWEPELMGLVEAWA
RGVAWNDLIANTSLDEGDVVRIMRRTIDLLAQVPYCEAISEQLRSHARQALKAINRFPVA
EADDLLKAAAAESEPLNPATERAA
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcaggacccccaggctgcacggcccgccagtgagggatctcctgatccggcg
caattgttccccttccagctggatgacttccagctggaagcgatcgatgccctcaatcag
gggcattcggttgtggtgagcgccccgacgggatccggaaagaccctcgtgggtgagtac
gccatctaccgagccatcgcccatggcctgaaggtgttctacaccacccctctcaaggct
ctgtccaatcagaagctgcgcgatttccgcgagcagttcggggccgacaacgtcggtttg
atgaccggtgacctcagcgtgaaccgtgaggcctcaatcgtggtgatgaccacggagatc
ttccgcaacatgctgtacgcggaagccgatcagtccgacgacccgctggcgggtgtggag
gcggtggtgctggatgagtgtcactacatgaacgactcgcagcgcggcacggtttgggaa
gagtcgatcattcactgcccaccgccggtgcagctggtggcactctccgccacggttgcc
aatgccggtcagctcaccgactggattgaacgggtccatggccccacccgtctggtggtc
agcgacttcagacccgtccccctccagttcagtttttgcagcgccaagggcctgcatccg
ttgctgaatgaccaaggcaccggcctgcatcccaactgcaaggtgtggcgcgctcccaag
gggaacaagcgcaagggacgctcccagcgcccgccccagcccgagccgccgccgatcagt
tttgtggtcgctcagatggcggcgcgggagatgttgccagccatctacttcatcttcagt
cgccggggctgcgacaaagccgtgcgcgatctcggcgtgcagtgtctggtcagcgagtct
gagcaggcacgcattcgtgagcgcctcaaggcctacacagaggccaatccggaggcggtg
cgtgatggcttgcatgctgatgcgctcctgcgggggattgctgcccatcacgccggcgtg
ctgccggcgtggaaggagctgatcgaggagttgttccagcagggtttggtgaaagttgtg
ttcgccacggaaaccctggcggcggggatcaacatgcctgcgcgcagcacggtgatctcc
tctctctccaagcgcacggagcggggccacaggccgctgatggcgagtgaattcctgcag
atggccggtcgtgccggtcggcgtggcctggattcaaagggctatgtggtgacggtgcag
agtcgttttgaaggggtgcgagaggcgggacaactggccacaagcccgtcggatcccctc
gtcagtcagttcacacccagctacgggatggtgctcaacctcttgcagcgccatgatctg
gccaaggctcgtgagctggttgaacgcagcttcggccgctatctggccagcctcgatctt
gttgaggaagaggaaattctccagcagctgcgccttcagctcgggcagttgcagggcacc
gccggtgatgtgccctgggaagatttcgaagactatgaaaagctgcgtggccgcctgcgc
gaagagaggcgtctgttgcgcatccttcagcaacaagctgaggaaaccctggcccatgag
ctcacactggcgctgcagtttgccagcgtcggcacgctggtgagtctgaaagctccgcag
ctgcgcggtggcgtgacgccagccgtgatcgtggagaaatgcgagggtcccggccagttc
ccgctcctgctgtgcctcaccagcgacaacgtctggctcatgctgccctgtcaggccgtg
gtgagcctgcatgcggaattgagttgtctgcaggtggatgggctgcaggcgcctgagctc
ggacgtgctggagagcttcgccatggcgatcagcacagtggtgggctcgctcttgctgtg
ggtcacatggcccagcgccatgacatgaccacaccccagtacgaccttgccggcgaggtt
ctgagccagatgcagaccgtcaaggagctcgaggctgagctggaagcccatcccgcccac
cgctggggggatcgcaagcagctcaagaagcaccggcggcgcatggaggagctggaactg
gaaatcaccgagcgccagcaactgctccatcaccgtgccaaccgacactgggataccttt
ctctccttgatggagattcttcagcacttcggcgctctcgatgacctcgtgccgacggag
atcggcagaaccgtggcggctctgcgcggtgacaacgagctctggctcggtctggcgctg
atgagtggtcacctggatgatttgccacccgccgagctcgcggcggtgttcgaggcgatc
agcaccgaagtgaaccggcctgacctctggagcggcttcccgccgccgccccgggccgaa
gaggcccttcatgatctttcaggactgcgacgggaactgctgcgggcccaggaacgccat
caggttgtggtccctgcttggtgggagcctgaactgatggggttggtggaggcctgggcc
cgcggtgtggcctggaatgatctgatcgccaacacttcgctggatgagggtgatgtggtt
cggatcatgcgacgcaccattgatctgctggcgcaggttccctactgcgaggcgatcagc
gagcagctgcgcagccatgcccgtcaggcgctgaaagcgatcaatcgcttccctgtggcg
gaagcggatgatttgctcaaggctgcagcagcggaatcggagccgttgaatcctgcaacc
gagagggctgcctga
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