Synechococcus sp. WH 7803: SynWH7803_2147
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Entry
SynWH7803_2147 CDS
T00524
Symbol
csd
Name
(GenBank) Selenocysteine lyase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
syx
Synechococcus sp. WH 7803
Pathway
syx00450
Selenocompound metabolism
syx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SynWH7803_2147 (csd)
Enzymes [BR:
syx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
SynWH7803_2147 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
SynWH7803_2147 (csd)
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Gene cluster
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Motif
Pfam:
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
SelA
Cys_Met_Meta_PP
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
CAK24573
UniProt:
A5GNQ8
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All DBs
Position
complement(1968546..1969814)
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AA seq
422 aa
AA seq
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MTTLSRDVGVTLAERTRSDFPILDQLDSQGGPLVYLDHAATSQKPQAVLDALRGYYSNDN
ANVHRGAHQLSARATEAFEGARAAVARFVGAAGPDEVVFTRNATEAINLVARTWGDANLQ
AGDEVLLSVMEHHSNLVPWQQLAQRTGCVLRHVGITESGELDLDDLRQQLNKRTRLVSLV
HISNTLGCRNPVEEIAALAHGVGALMLVDACQSLAHQSTDVNQLGVDFLVGSSHKLCGPT
GMGFLWARKDLLDAMPPFLGGGEMIQDVFLDHSTWAALPHKFEAGTPAIGEAVGMGAAIT
YLEALGLEQIAAWEAQLTRYLFQQLDSIEGLRILGPTPEQQPGRGALATFLVDGVHANDI
ASMLDLAGICIRSGHHCCQPLHRHFKVTGSARASLSFTTTFEEIDRFAAELQGVIAFFRE
HG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaccacactttctcgtgacgttggcgtaacgcttgcggaacggactcgttccgatttt
ccgatcctggatcagttggattctcagggtggtcccttggtctatctcgaccatgcggcc
accagtcagaagccccaggcggtgctcgatgccttgcgcggttactacagcaatgacaac
gccaatgtgcatcggggggcccatcagctcagcgcccgtgccactgaggccttcgaggga
gcccgcgctgccgtggcccgattcgtgggcgctgccgggcccgatgaagtggtgtttact
cgcaacgccacggaggccatcaatctggtggcgcgcacctggggggatgccaaccttcag
gccggcgatgaggtgctgctcagcgtcatggagcaccacagcaatctcgtgccctggcag
cagctcgcccagcgcacgggttgcgttctgcgtcatgtgggcatcaccgagagcggagag
ctcgacctcgatgatttgcgtcagcagctcaacaagcgcacccgtttggtgagccttgtg
cacatcagcaacaccctgggttgccgcaatcccgtggaggagatcgcggccttggcccat
ggggttggtgcgctgatgctcgtggatgcctgccagagcttggcccaccaatccaccgat
gtgaatcagctgggtgttgattttcttgtggggtcctcccacaagctgtgcgggcctacg
ggcatgggcttcctttgggcacggaaagacctgcttgacgccatgcctccattcctgggg
ggtggcgaaatgatccaggatgtattcctcgatcacagcacctgggctgctttgccccat
aagttcgaggccggcacccccgccatcggcgaagctgtgggcatgggcgcggcgattacc
tacctcgaggcgctcggcttggagcagatcgctgcctgggaagcgcaactcacccgctat
ctcttccagcagctcgacagcatcgagggactgcgcatccttggtccgacaccggagcag
cagccgggacggggagcccttgccacgtttctcgttgatggtgtccacgccaacgacatt
gcctccatgctcgatctcgccggcatctgcatccgcagcggacaccactgctgccagcct
ctgcatcgtcacttcaaggtgacgggttcggccagggccagcctcagcttcaccacgacg
tttgaagagatcgatcgttttgccgccgagcttcagggcgtgattgcgttcttcagggag
cacggctga
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