Synechococcus sp. WH 7803: SynWH7803_2436
Help
Entry
SynWH7803_2436 CDS
T00524
Name
(GenBank) Possible small-conductance mechanosensitive ion channel, MscS family
KO
K16052
MscS family membrane protein
Organism
syx
Synechococcus sp. WH 7803
Brite
KEGG Orthology (KO) [BR:
syx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syx02000
]
SynWH7803_2436
Transporters [BR:
syx02000
]
Other transporters
Pores ion channels [TC:
1
]
SynWH7803_2436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
CAK24862
CyanoBase:
SynWH7803_2436
UniProt:
A5GPJ7
LinkDB
All DBs
Position
2268022..2269086
Genome browser
AA seq
354 aa
AA seq
DB search
MGFLQTNTGLVVGTLTLIAAWFLLNVLGRHGRNIGSLITRSLRRPLLIGLGVSLYSTWIT
HWIDKRIDVVDQLTLKRLSATLLIITISWATLNVGHAILQSGSMRRWIQMDDEQDEAMLI
NLLGRLFTILTLLITTAAMMVNLGIPSAAIATLLGGAGIGFTFATQQISQNFLSGFMLFF
NRPFKEGDWINVDELQGTVESIGWYYTRIRTFDRRPLNIPNSIFATKPIENPGQMYNRRI
LANISLRYEDISKIAGITDKVREHLKQHPHIDQKQIILVNFNQWDASSINMMVYCFTKTT
VWAEWLNIQQAIFLDIAGIVQGSGADFAFNCMTLYPASSSNPNQVTQLLSPDAS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtggggtttctgcaaaccaacactggccttgtcgttggaaccctgacgttgatcgcggcc
tggtttctgctgaatgtcctaggccgacacgggcgcaacatcggcagtctgatcacacgc
agcctgaggcgaccgctactcatcggtcttggcgtgtcgctctatagcacttggatcacc
cattggatcgataagcgcatcgatgtggtggatcagctcacactgaagcgcctctccgcc
acgctgctgatcatcaccatcagctgggcgaccctcaatgtgggacacgccattctccaa
tcggggtcgatgcggcgctggatccagatggatgacgagcaagacgaagccatgctcatc
aatctgctggggcgcctcttcacgattctcacgttgctgatcaccacagcagcgatgatg
gtgaacctcggtatcccctcagccgccatcgccaccttgctgggaggtgctgggattggc
ttcacctttgccacgcagcaaatcagccagaattttctctccggcttcatgctcttcttc
aatcgcccgttcaaagaaggggattggatcaacgtcgacgagctgcaaggaaccgtggaa
tcgattggctggtattacacaagaattcgcacatttgatcgcaggcccctcaatatcccc
aactcgatttttgccacgaaaccaattgaaaaccccggccagatgtacaaccggcgcatt
ctggccaacatctccctacgctatgaagatatcagcaaaatcgctggaatcactgacaaa
gtcagggagcatctgaagcaacacccccacatcgatcagaaacagatcattctcgtgaat
ttcaaccagtgggatgcttcatccatcaacatgatggtgtattgctttaccaaaacaaca
gtctgggcggaatggctcaacattcaacaggcgatcttccttgatatcgctggcatcgtg
cagggaagcggcgctgatttcgccttcaattgcatgactctctatccagcatcgtccagc
aatccaaaccaagtgactcaattgttgtcgccagatgcctcgtga
DBGET
integrated database retrieval system
