Synechocystis sp. PCC 6803 GT-S: SYNGTS_0076
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Entry
SYNGTS_0076 CDS
T02098
Symbol
cpcF
Name
(GenBank) phycocyanin alpha phycocyanobilin lyase CpcF
KO
K02289
phycocyanobilin lyase subunit beta [EC:
4.4.1.32
]
Organism
syy
Synechocystis sp. PCC 6803 GT-S
Pathway
syy00196
Photosynthesis - antenna proteins
syy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
syy00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
SYNGTS_0076 (cpcF)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
syy00194
]
SYNGTS_0076 (cpcF)
Enzymes [BR:
syy01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.32 C-phycocyanin alpha-cysteine-84 phycocyanobilin lyase
SYNGTS_0076 (cpcF)
Photosynthesis proteins [BR:
syy00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
SYNGTS_0076 (cpcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT_PBS
HEAT
TAF6_C
API5
Cnd1
Vac14_Fab1_bd
Tra1_ring
RTP1_C1
PDS5
Motif
Other DBs
NCBI-ProteinID:
BAK48824
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All DBs
Position
complement(88017..88661)
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AA seq
214 aa
AA seq
DB search
MEGNSVVTPEIERLIQAVETADSAAKLVGAVRALAATRSPLAVPQLTTVLRYNNPGAAVA
AVDGLIQIGDAAMTHLLANMDGYNYGARAWATRACAGIGDPRALALLQEAALTDFALSVR
RAAAKGLGFLRWQSLPQEEQETVQKAIYDTLIQVCEDPEWVVRYGAIAGLENLAKQAQHY
RQPLKDFLQSFVEQEPEAIVGERILWTLENIGPI
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggagggtaatagcgtcgtaactccagaaatcgaaagattgatccaagcggtggaaacc
gcagactcggcagccaaattagtgggggctgtgcgggctttggcggccacccgatcgccg
ttggcagtgccccaattaaccacggtgttgcgctacaacaatccaggggcagcggtggcg
gcggtggatgggctgatccaaatcggcgatgcggccatgactcacttgctggccaatatg
gatggctacaattatggcgctagggcctgggccaccagagcctgtgctggcatcggcgac
cccagggcattggccctattgcaggaagcggccctgacggattttgccttgagtgtgcgg
cgggcggcggccaagggactgggttttctccgttggcaatccctaccccaggaagaacaa
gagacagtacaaaaagccatttacgacactctgatccaagtttgtgaagatcctgaatgg
gtggtacgctacggggcgatcgccggtctggaaaatttagccaagcaggcccagcattac
cgccaacccctaaaggattttctccagtcttttgtagaacaagaaccagaggcgatcgtg
ggggaacgcatcctttggaccctggaaaacatcggcccaatctag
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