Synechocystis sp. PCC 6803 GT-S: SYNGTS_0796
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Entry
SYNGTS_0796 CDS
T02098
Symbol
sll1121
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
syy
Synechocystis sp. PCC 6803 GT-S
Pathway
syy03420
Nucleotide excision repair
syy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SYNGTS_0796 (sll1121)
03430 Mismatch repair
SYNGTS_0796 (sll1121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syy03400
]
SYNGTS_0796 (sll1121)
Enzymes [BR:
syy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SYNGTS_0796 (sll1121)
DNA repair and recombination proteins [BR:
syy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SYNGTS_0796 (sll1121)
MMR (mismatch excision repair)
Other MMR factors
SYNGTS_0796 (sll1121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
BAK49544
LinkDB
All DBs
Position
complement(867257..869569)
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AA seq
770 aa
AA seq
DB search
MGRLRGTLTSAIAMNQTSLNLEQLRQSLRSSQRPLADWHGGEMAVSAVPGAGKSHSLSVA
AAIAIAHHGLHNQEKLLIVTYTRSAAAAIKGKVNQRLRALGLPSLGFTVQTLHGLALSIA
LRHPEVSGLDPEQQTLVSPQKGHRLIKDAVEQWRRENPKTYQTLVEAGNFDGETTETLRR
QAVLSTEVLPELTKTVVAEAKSSGLSPQAVADMGRIAPGSELLLMGAGLFKHYQALMEAK
NWIDYNDMILAALRVLEDPHLCRQWQEQFFGVFEDEAQDSSPLQEKLLTKLAQNADGTIR
LIRVGDPNQAINSSFTPADPVYFDQFCQRCQALGSFATMDQAGRSNLQVIAAANFLLEWV
NQDWQARFNSGPKGDATLPFRPQAIRPVEPGDPQPNPPATDGGVEIRFPQDINEEVEQIR
HRLVPLLLANPHHNAAILVRENRQGRFVADRLKDVEKDGGLKVLDVGDQDRNSRIPGEIL
SLLQFIDRPHSPDLLKATLTVLQERQLIPTQDLNALAAVPEQFLYPTPLMPPLASPAVSA
QGLCRSLLKARLELPAYQLIAFLGLALNYDSSDLATLQKLSERLQVQTQPERSLKNLLSE
LHTIANDEQFEAIASDSDEKYTRPGQITIITMHKAKGLDWDYVFLPFLHQDTLPGDLWVP
KGGQFLGQFTLAEVARAQIRTVVHHRQQQKPQAIALPVTATAWQEARRLKEAEEYRLLYV
AMTRAKRLLWLSAAQEGPFAWNQMQARKSPRLQPKQPSQALLALQKRFGS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgggtagattgaggggaacactaacgtcggcgatcgccatgaatcaaacttccctgaac
ctagagcaactccgccagagtttacgcagcagtcaacgacctctggcggattggcatggg
ggagagatggccgtttccgccgtgcccggggctggcaaatcccatagtctttctgtggcg
gcggcgatcgccattgcccaccatggtttacataaccaggaaaaattgctgattgtgacc
tacacccgttcagcggcggcggccatcaaaggcaaggttaatcaacgtttacgggccttg
ggcttacccagtttgggatttacggtgcagaccctccacggtttagccctcagcattgcc
ctacgccatccggaagtatcggggctagacccggagcaacagaccctggtttcgccccaa
aaaggccatcgcttgatcaaagatgcggtggaacaatggcggcgggaaaatcctaaaacc
tatcaaaccctggtggaagcgggtaattttgacggggagacaacggaaaccctgcggcgg
caggcggtgctgagcacggaagttttacctgaattaaccaaaactgtggtggcagaagca
aaaagttctggcctctctccccaggctgtggcggacatgggtcgcattgcccccggtagc
gaactcctgctgatgggagccggtttgttcaaacattaccaagccctgatggaggcgaaa
aattggatcgactataacgacatgattttggccgccctgcgggtgctagaagatccccac
ctttgccgccagtggcaggaacaattttttggtgtttttgaagatgaagcccaggactct
agccctctgcaggaaaagttactgaccaagctggcccaaaacgccgatggtaccattcgt
ttaattcgggtgggggaccccaatcaagccattaactctagctttacccccgctgacccc
gtatatttcgatcaattttgccaacggtgccaggctttgggcagtttcgccaccatggac
caggcggggcgcagtaatttacaggtaattgcggcggccaacttcttgctggaatgggtt
aaccaagattggcaagcacggtttaatagtggtcccaaaggggatgcgaccttacccttc
cgcccccaggcaattcgtccagtggaaccgggggacccccaacccaatcctccggccacc
gatgggggagtggaaattcgttttccccaagatatcaatgaagaagtagaacaaattcgc
catcggctagtgcccctgttgttggccaatcctcaccacaatgctgccattttagtacgg
gaaaatcgccagggaaggttcgtggccgatcgcctgaaggatgtggaaaaagatggtgga
ctgaaggttttggacgtgggggaccaggatcgtaattcccgcataccaggggaaatcctt
agtcttttacaatttatcgaccgcccccattcccccgatctcctcaaagccaccttaaca
gtgttgcaggagcgccaactaattcccactcaagatttaaatgctttggcggcggtgccg
gaacaatttctctaccccactcccctgatgcctcccctggcctccccggcggtttctgcc
cagggcctatgtcgtagtttgctcaaagcccgcctggaactgcccgcctatcaattgatt
gcttttttgggtctggccctcaactatgacagctcagatttagccaccttacaaaagttg
tcggaacgtttacaggtacaaacccaacccgaacgctcattaaaaaatttgctcagcgaa
ctccacaccattgccaacgatgaacaatttgaggcgatcgccagcgatagtgatgaaaaa
tacaccagaccggggcaaatcaccattatcaccatgcacaaggccaagggattggattgg
gactatgtgtttttaccctttttgcaccaggacaccctccctggcgatttatgggtaccc
aagggagggcaatttttggggcagtttaccctagcggaggtggccagggcccaaattcgc
accgtggtacaccatcgccaacagcaaaagccccaggcgatcgccctgccggtcacggcc
accgcttggcaagaagcccgccgcctcaaggaagcagaggaataccgactactctacgtc
gctatgaccagggccaagcgtttattgtggctatccgccgcccaggaagggccctttgcc
tggaaccaaatgcaagcccgcaaatccccccgactacaacccaaacaaccatcccaggcc
ctattggccctacaaaagcgttttggttcctag
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