Synechocystis sp. PCC 6803 GT-S: SYNGTS_0884
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Entry
SYNGTS_0884 CDS
T02098
Symbol
hupA
Name
(GenBank) DNA binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
syy
Synechocystis sp. PCC 6803 GT-S
Brite
KEGG Orthology (KO) [BR:
syy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syy03032
]
SYNGTS_0884 (hupA)
03036 Chromosome and associated proteins [BR:
syy03036
]
SYNGTS_0884 (hupA)
03400 DNA repair and recombination proteins [BR:
syy03400
]
SYNGTS_0884 (hupA)
DNA replication proteins [BR:
syy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SYNGTS_0884 (hupA)
Chromosome and associated proteins [BR:
syy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SYNGTS_0884 (hupA)
DNA repair and recombination proteins [BR:
syy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SYNGTS_0884 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF979
Motif
Other DBs
NCBI-ProteinID:
BAK49632
LinkDB
All DBs
Position
complement(970882..971184)
Genome browser
AA seq
100 aa
AA seq
DB search
MNKGELVHAVTDKAKEQLGESITKKEVDAVISAAIDCIMEVVAEGEKVTLVGFGSFEARE
RKEREGRNPKTGDKMLIPATKVPAFSAGKMFKDKVAPEKK
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggcgaattagtccatgcggtcacggacaaagcgaaagagcaactgggggaa
agcatcactaaaaaggaggtagatgcggtaatttcagccgccattgattgcatcatggaa
gtggtggccgaaggggaaaaagtaaccctagtgggctttggttcctttgaagccagggaa
cgtaaggaacgggagggccgtaaccccaaaactggggataaaatgctcattccagccact
aaggtgccggctttctccgcaggcaaaatgttcaaagataaagttgctcctgagaaaaaa
taa
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