Synechocystis sp. PCC 6803 GT-S: SYNGTS_1960
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Entry
SYNGTS_1960 CDS
T02098
Symbol
slr0401
Name
(GenBank) spermidine/putrescine-binding periplasmic protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
syy
Synechocystis sp. PCC 6803 GT-S
Pathway
syy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
syy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SYNGTS_1960 (slr0401)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syy02000
]
SYNGTS_1960 (slr0401)
Transporters [BR:
syy02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SYNGTS_1960 (slr0401)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
TAT_signal
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
BAK50708
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Position
2149064..2150218
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AA seq
384 aa
AA seq
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MNLPCYSRRHFLQSAAAVGLATGLGGCWPGQGSSKEVQFLNRSLPPQLINQFQRQFPQAK
ELNFKAIANLQSLFDNLQTWHNAQNADTSKGLWGSGSRANQTPKAQLVTGGDLWLERVIK
EKLIQPFVPDQLSQWSSLPPRWQLLGQRNDQGLPDQSGKIWAVPYRWGPTMIIYRQQPFA
DLGWQPTDWSDLWRPELKQRIALVDDPREAIGLTLKKLGYSYNVTNPKAVNALPSALQEL
ATQVKFYNSKYYLQALLNKDVWLAVGWSNQIIPLLRNQSELRAVIPSSGTSLWADLWTMP
AEMEAAEITYEWLNFSAQPSSLEQMATFSNALAVPYQNLEVSALSTNPLLAFSPELLERC
EFLAPLDIATVNQYKQLWQTMRSA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaccctgctattcccgccgccattttctccagtccgccgccgctgtcggcctt
gccacgggtctaggaggctgttggcctggccagggcagtagcaaagaagtgcagtttttg
aaccgttccctgccgccccagttaattaaccaatttcagcggcagtttccccaagctaag
gaattaaatttcaaggcgatcgccaatctgcagagtttgttcgacaatttacaaacctgg
cacaatgcccaaaatgcagatacttccaagggactgtggggcagtggatcgagggcaaat
cagaccccaaaagcccagttggtcaccgggggagatttatggttggaacgggtaatcaaa
gaaaagctcattcaaccctttgtccccgaccaattgagccaatggtctagtctgcctcca
cggtggcaattgttggggcaacgcaatgaccaaggcttaccggatcaaagcggcaaaatt
tgggctgttccctaccgttgggggcccaccatgattatttatcgccaacaaccatttgct
gatttaggttggcaaccgaccgattggtctgacctctggcggccagagttaaagcaacgc
attgctctggtggatgatcccagggaggcgatcggtttgactctgaaaaagctgggttat
tcctacaatgtcaccaaccccaaagctgttaatgccctaccttccgctttgcaagaattg
gcgacccaagtgaagttttacaacagtaaatattatctccaagctctactcaataaagat
gtatggttagcagtgggctggtcaaaccaaattattcctctgctgagaaatcagtcagaa
ctcagggcggttattcctagttccggtacatccctctgggctgatctctggactatgccc
gctgagatggaggcggctgaaattacctatgaatggttaaatttttccgcccagccttcc
agtctagagcagatggcaactttcagtaatgccctggcggtgccctatcaaaacctggag
gtttccgccctgagcactaaccctttattggctttttcaccggagttactggagcgttgt
gaatttctcgcgcccctggacattgccaccgtcaaccaatataagcaactctggcaaacc
atgcggagtgcttag
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