Synechocystis sp. PCC 6803 GT-S: SYNGTS_1972
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Entry
SYNGTS_1972 CDS
T02098
Symbol
hat
Name
(GenBank) hypothetical protein
Organism
syy
Synechocystis sp. PCC 6803 GT-S
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
DSE1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
AAA_35
Beta-prop_Vps41
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
NBCH_WD40
Beta-prop_TEP1_C
ASA1
CFAP251_N
Beta-prop_WDR41
PEP5_VPS11_N
Beta-prop_EIPR1
Tricorn_2nd
Beta-prop_VPS8
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
eIF2A
Beta-prop_NOL10_N
RMC1_N
Beta-prop_NWD2_C
PD40
Beta-prop_pof12
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Beta-prop_SCAP
AAA_22
Beta-prop_Nup120_160
Beta-prop_ACSF4
WDR54
WD40_like
Nucleoporin_N
Beta-prop_ELP1_1st
B-prop_COPA_B_2nd
WD_LRWD1
Motif
Other DBs
NCBI-ProteinID:
BAK50720
LinkDB
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Position
2172014..2175589
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AA seq
1191 aa
AA seq
DB search
MSPIALNLLQSTPYQVGGSLAANHPSYSQREADRELLAQLRAGKFCYVFNCRQMGKSSLR
VRAMHQLQQDGVVCVSIDITSLGTEADPQKWYNGIITQLYLGLPLAGKVALKPWLREREQ
LSPIQKLREFVETIILQTIGDRQIVIFIDEIDKVLSLPFSLDDFFSYIRFCYNQRADDHE
YNRLSFALFGVATPSDLIDNKTQTPFNIGQAIALTGFTLTEALPLSAGLPVDEVSAREIL
GEILAWTGGQPFLTQKVCELVAEALQKGDLDCQSQTIATTIAQLIEEKIIRHWESNDEPV
HFRTIGDRLLKDQARSGQLLGLYQEILHKGAIPADDSVEQTVLRLTGLVVKVKGQLRPYN
PIYQAIFNAQWVSKELNKLRPYGTNLQAWINSNYQDSSRLLRGEALREALAWASSKNLSG
VDYRYLNASQNQEQEASLAANQILTQANVKAKRMISFGIVVLMMSLGGSAIALSQAYFAT
LKQQRSQQGTELQRLGTSAQRQFTFDQIPGLVTALEAGNQLHHLVKADETLSQYPATSPL
VSLQQILSQIAEKNVLTGHRDGVTSVAISSHKNLIASASRDGTVHLWTPQGEFLREFTGH
TGSIYRVDFSPNGKIFATAGQDQTVKIWDLDGNLLQTLKGHQDSVYSVSFSPDGEILAST
SRDRTVRLWHWRSGKTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQIRLWDLDGNLIRQ
FGLPEVAFFGVNWHPNGNLLAVAADDGTVRLWTPQGEIKATLSGHDEFVTRVVFTPDGKQ
LFSSSSNGSVIHWSTSGKMLKKYQGYPEAIFGLALASNGALLAIGAENNLVKVWDMSPKS
DLVNLNLPAVLGAVAENAKTNTIALAMENEPLILFNTKNRSRQFLSDASQNLDRLKFSAD
GQWLLGQRGRQWQLWQLQTKSQLLKTWRTDISRVYDVDLRTTPTSPQWAIAMATGSGEVQ
LWQGTKNNQTSGNQSQGVPIELNDPIVLALGNSIQRKEPIRSVSLHPTLPQLAAGDEQGN
LTLWNFDGTLIRSIVAHGDRLNQLQYSPNGKYLLSAGREGTAKIWSVEGQLLHTLKSDPL
PIDQIAISPDSQWIATAASDGMVRLWDQQGNLRGEFTSTSGSLLGLDFNRQGQWLLAVAQ
NGDLQSWPVTPEKERLRQLVEQGCDWLRDYLATEKQPAQTYSLEFCQPTGN
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgatcgccctcaatttattgcagtcaaccccctatcaggtgggggggagcttg
gccgctaatcatcccagctacagtcaacgggaagcggatcgggaactattggcccagttg
cgagcgggcaaattttgctatgtgttcaactgccggcagatgggtaaatctagcctgcgg
gtgcgggccatgcatcaactgcaacaggacggggtggtgtgtgtgtccattgacatcacc
agtttaggcaccgaagctgaccctcagaagtggtataacggcattattacccagctttac
ctcggtttgcctttggcggggaaggtggccctcaagccttggttacgggagcgggaacaa
ctcagtcccattcaaaagctacgggaatttgttgaaacaatcattcttcaaaccattggc
gatcgccagattgtcatttttatcgatgaaattgataaggtattgagtctgcccttttcc
ctggatgactttttttcctacattcgtttttgctataaccaacgggccgatgaccacgaa
tataaccgcctgagttttgccctgtttggcgtagccactccttcagatttaattgataac
aaaacccaaacgccatttaacattggccaagccattgccctcacgggttttaccctaacg
gaagctctgcccctgagtgctggtttgccggtagatgaagttagcgcccgggaaattttg
ggggaaattttagcttggactggggggcaaccctttttaacccagaaagtgtgcgaattg
gtggcagaagctctacagaaaggggatttagattgccaatctcaaactattgccactacc
attgcccaactaattgaagaaaaaattatccgccattgggaatccaacgatgagccggta
cactttcgcaccattggcgatcgcctattaaaagatcaagcccgcagtgggcaactgttg
gggctgtaccaagaaattttgcataaaggtgctattccggcggacgatagcgttgaacaa
acggtgttgcgactaacggggctggtggtgaaagtgaaagggcagttgcgtccctataac
cccatttaccaagcaatttttaacgcccaatgggtcagtaaggaactgaacaaactccga
ccctatggcaccaacctccaagcctggatcaattccaattaccaagattcttcccgatta
ctgcggggggaagccctacgggaagcattggcttgggccagtagcaaaaacctcagcggg
gtggattaccgctacctcaacgccagccaaaatcaggaacaggaagcttccctcgctgcc
aaccaaattttgactcaagccaatgtcaaagcgaaacggatgatcagttttggcattgtg
gtgctgatgatgtccctggggggctcggcgatcgccttgagccaggcctactttgccacc
ctcaaacaacaacggagtcaacagggcacagaactccaacgcttaggcaccagcgcccaa
cggcaatttacctttgatcaaattcctggtttggtcaccgctttggaagccgggaaccaa
cttcatcacctggtcaaagcggatgaaacccttagtcaataccccgccaccagtcccttg
gtaagtttgcaacaaattcttagccaaattgccgaaaaaaacgttttgacgggccatcgg
gacggagttaccagcgtagccatcagttcccataagaatttgattgcttctgcttcccgg
gatgggacagtgcacctttggacaccccagggggaatttttacgggaattcaccggccac
acaggcagtatctaccgggtggatttctcccccaacggcaaaattttcgccaccgctggg
caagatcagacggtcaaaatttgggacctagacggtaatctgctccaaaccctcaagggc
catcaagattctgtttatagcgttagcttcagccccgacggggaaatccttgcgtccacc
tcccgagaccgcactgtgcgcctttggcattggcgatcgggtaagaccttggctgtgttg
gggggccatactaaatccgtggatgacgcccaatttagccctgacggccaaaccctagtc
agcgtttgtcgggacggacaaattcgcctctgggatttagatggtaatctcatccgtcag
tttggcttaccggaggtggctttttttggagttaattggcatcccaatggcaatctactg
gctgtggcggcggacgatggcacagtgagactgtggactccccaaggggaaattaaagcc
accctatcgggccacgatgaatttgttaccagggtggtcttcacccccgatggcaaacag
ttattttccagcagtagtaatggcagtgtcattcattggtccaccagcggcaaaatgctg
aaaaagtaccagggttacccagaggcaatttttggtttggccttggcttccaatggagcc
ctattggcgatcggtgcggagaataacttagtgaaggtttgggacatgagcccaaagtcc
gatttggttaacctcaatctgcccgctgtactcggggcggtggcggaaaatgctaagacc
aacaccattgctttggccatggaaaatgagcccttaattttgttcaacacaaagaatagg
agccgacagtttttatccgatgctagccaaaatcttgaccgcctcaagttcagtgccgat
ggccaatggttattggggcaacggggtcggcaatggcaactttggcaactccagactaaa
tcccaattgctcaaaacctggaggacggatattagccgggtttacgacgtagacctgcgt
actactcccacatccccccaatgggcgatcgccatggccaccgggagcggagaggtgcaa
ctttggcaggggacaaaaaataaccagaccagtggaaaccagtcccaaggggttcccatt
gaattgaatgaccccatagtccttgccttgggaaactccatacaacggaaagaacccatc
cgcagtgttagtctccacccgaccttgccgcaattggccgctggcgatgaacagggtaat
ctcaccctctggaattttgatggcaccctgattagaagtattgtggcccacggcgatcgc
ctcaatcaactgcaatacagccccaacgggaagtatctgttaagcgctgggcgggaaggc
accgccaaaatttggagtgtggagggacaactattgcataccctaaaaagtgacccccta
cccattgatcagattgccatcagtcccgacagccaatggattgccaccgctgccagtgac
ggcatggtcagactttgggaccaacagggtaacctccggggggaatttaccagcacatca
ggttcgctattagggctagattttaatcggcaagggcaatggttgttagccgtggcccaa
aacggggacctacaaagttggcccgtcactccagagaaggaacggctccgtcaactagtg
gaacagggttgtgactggttgagagattacctagccacggagaagcaaccggcccagacc
tattccctagaattttgccagccgacaggaaattaa
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