Synechocystis sp. PCC 6803 GT-S: SYNGTS_2107
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Entry
SYNGTS_2107 CDS
T02098
Symbol
slr0181
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
syy
Synechocystis sp. PCC 6803 GT-S
Pathway
syy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SYNGTS_2107 (slr0181)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syy03400
]
SYNGTS_2107 (slr0181)
DNA repair and recombination proteins [BR:
syy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SYNGTS_2107 (slr0181)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SYNGTS_2107 (slr0181)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
BAK50855
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All DBs
Position
2328153..2328935
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AA seq
260 aa
AA seq
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MKGMAFGESDRLVTIFSPEYGLIRAIAPGARKPKSSLRGRTELFVVNQFLLFAGKSLDRI
NQAETQYSYPGLGQNVCNLAAGQYLIELILALGTEASAQTSLYELFTEHLRRLETEATVE
NIYGHLAQALFHCLGAEGIAPQFHHCAITAQTISPNFYDRQWRVGFSPELGGIVDLRSSR
DMGPIPQMRRLTAMELSLLQQLNQPALPDPQQYLPVIARKNFRLWDWVKAENLMRYYAQR
QLGKSFRAAVLLDSMWEVDF
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaggtatggcctttggggaatctgatcgcctagtgaccattttctcgccggagtat
ggtttgatccgagccattgcgccgggggctagaaaaccaaaatctagtctcaggggtcgc
accgaactatttgtagttaaccaatttctgctatttgcgggaaaaagtttggaccgtatc
aaccaagcggaaacccaatattcctaccctggcctggggcaaaatgtttgtaatttggcg
gcgggtcagtacttaatcgagctaatcctggccctcgggacagaggccagtgcccaaaca
tccctgtatgaactgtttaccgaacatctacgacggttagaaacggaagccacagtggaa
aatatctatggccatctagcccaagcattattccattgcctcggggcagagggcattgcc
ccccaatttcatcactgtgccatcacggcccaaactattagtcccaatttttacgatcgc
caatggcgggtgggctttagcccagaattggggggcattgtcgatcttcgcagttctagg
gacatgggccccattccccaaatgcgtcgcttaacagctatggaactaagtttattgcaa
caactcaaccaacctgccctaccggacccccaacagtatctaccagtgatcgccaggaaa
aattttcgcctctgggattgggtaaaagcggaaaatctgatgcgctactatgcccaacgt
caattgggaaaaagcttccgggccgctgttttactagatagcatgtgggaggtggatttt
tag
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