Synechocystis sp. PCC 6803 GT-S: SYNGTS_2276
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Entry
SYNGTS_2276 CDS
T02098
Symbol
groEL-2
Name
(GenBank) 60kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
syy
Synechocystis sp. PCC 6803 GT-S
Pathway
syy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SYNGTS_2276 (groEL-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syy03019
]
SYNGTS_2276 (groEL-2)
03110 Chaperones and folding catalysts [BR:
syy03110
]
SYNGTS_2276 (groEL-2)
03029 Mitochondrial biogenesis [BR:
syy03029
]
SYNGTS_2276 (groEL-2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
syy04147
]
SYNGTS_2276 (groEL-2)
Enzymes [BR:
syy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SYNGTS_2276 (groEL-2)
Messenger RNA biogenesis [BR:
syy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SYNGTS_2276 (groEL-2)
Chaperones and folding catalysts [BR:
syy03110
]
Heat shock proteins
HSP60 / Chaperonin
SYNGTS_2276 (groEL-2)
Mitochondrial biogenesis [BR:
syy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SYNGTS_2276 (groEL-2)
Exosome [BR:
syy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SYNGTS_2276 (groEL-2)
Exosomal proteins of other body fluids (saliva and urine)
SYNGTS_2276 (groEL-2)
Exosomal proteins of breast cancer cells
SYNGTS_2276 (groEL-2)
Exosomal proteins of colorectal cancer cells
SYNGTS_2276 (groEL-2)
Exosomal proteins of bladder cancer cells
SYNGTS_2276 (groEL-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF555
Motif
Other DBs
NCBI-ProteinID:
BAK51024
LinkDB
All DBs
Position
complement(2537816..2539474)
Genome browser
AA seq
552 aa
AA seq
DB search
MSKLISFKDESRRSLEAGINALADAVRITLGPKGRNVLLEKQYGAPQIVNDGITVAKEIE
LSNPEENAGAKLIQEVASKTKEIAGDGTTTATIIAQALVREGLRNVAAGANPVALRRGIE
KVTTFLVQEIEAVAKPVEGSAIAQVATVSSGNDPEVGAMIADAMDKVTKDGVITVEESKS
LNTELEVVEGMQIDRGYISPYFITDSDRQLVEFDNPLILITDKKISAIAELVPVLEAVAR
AGRPLLIIAEDIEGEALATLVVNKARGVLNVAAIKAPAFGDRRKAVLQDIAILTGGSVIS
EDIGLSLDTVSLDQLGQAVKATLEKDNTILVAGADKRASAGVKERIEQLRKEYAASDSDY
DKEKIQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLI
RLAGKIESFKAQLSNDEERVAADIIAKALEAPLHQLASNAGVEGSVIVEKVKEATGNQGY
NVITGKIEDLIAAGIIDPAKVVRSALQNAASIAGMVLTTEALVVEKPEPAAPAMPDMGGM
GGMGGMGGMGMM
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacttatttcctttaaggatgaatccagacgctctttggaagcggggattaat
gccctggctgatgcggtgcggattaccctcggccccaaaggtcgcaatgttttattagaa
aagcagtacggtgctccccagattgtcaacgatggcatcaccgtagccaaagaaattgaa
ctgtccaacccggaagaaaatgctggagctaagctaatccaggaagttgcttccaaaacc
aaggaaattgctggggatggcaccaccaccgccactattattgctcaagctttagtgcgg
gaaggtctgcgcaacgtcgccgccggtgctaatcccgtggctctccgtcggggcatcgaa
aaagttaccactttcctcgttcaagaaattgaggctgtggctaaacccgtggaaggttcg
gcgatcgcccaagtggccaccgtatcctccggtaacgatcccgaagttggggccatgatt
gccgatgccatggacaaagtcaccaaagatggcgtcatcaccgtggaggagtccaaatcc
ctcaacaccgaattggaagtggtggaagggatgcagatcgaccggggctatatttctccc
tacttcatcaccgatagcgatcgccagttggtggagtttgataatcctttaatcctcatc
accgataaaaaaatcagtgccattgcggaattggttcccgtactggaagctgtggcccgg
gccggtcgtcccctgttaatcattgcggaagacattgaaggagaagcccttgctacccta
gtggtcaataaagcccggggtgtactcaacgtggccgccattaaagcccccgcctttggc
gatcggcgtaaagctgtgttgcaagatatcgctatcctcaccggtggtagcgtcatttcc
gaagacattggcctgagcctcgacaccgtcagcttggatcaattgggccaagccgttaaa
gccactttggaaaaagacaacaccatcctcgtcgctggggccgacaaacgggcttccgct
ggagtcaaagagcggattgagcagttgcggaaagaatatgctgcttctgattccgattac
gacaaagaaaaaatccaagagcgcattgccaaactagccggtggtgtagctgtgattaaa
gtcggggccgcaacggaaaccgaactcaaagaccgcaaactccgcattgaagatgccctc
aatgccaccaaagccgcagtggaagaaggtattgttcccggtggtggtacaaccctaatt
cgtttagcgggcaaaattgaaagctttaaagcccaactcagcaacgatgaagagcgggtt
gccgccgacatcatcgccaaagccctggaagctcccctgcaccagttggccagcaatgct
ggggtagagggttccgtcattgtggaaaaagttaaagaagctactggcaatcaaggttac
aacgtcatcactggcaaaattgaagacctgatagccgctggcatcatcgaccccgctaaa
gtggtacgttctgctctgcaaaatgccgcttccattgctgggatggtgttgaccactgaa
gctttagtagtggaaaaacctgaacctgcggctcccgctatgcccgatatgggtggcatg
ggcggaatgggtggtatgggcggcatgggcatgatgtaa
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