Synechocystis sp. PCC 6803 GT-S: SYNGTS_2440
Help
Entry
SYNGTS_2440 CDS
T02098
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase,pyrimidine-specific, large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
syy
Synechocystis sp. PCC 6803 GT-S
Pathway
syy00220
Arginine biosynthesis
syy00240
Pyrimidine metabolism
syy00250
Alanine, aspartate and glutamate metabolism
syy01100
Metabolic pathways
syy01110
Biosynthesis of secondary metabolites
syy01240
Biosynthesis of cofactors
Module
syy_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
syy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SYNGTS_2440 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SYNGTS_2440 (carB)
00220 Arginine biosynthesis
SYNGTS_2440 (carB)
Enzymes [BR:
syy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SYNGTS_2440 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
ATP-grasp_3
GARS_A
ATP-grasp_5
ATP-grasp_2
RimK
Epimerase
Motif
Other DBs
NCBI-ProteinID:
BAK51188
LinkDB
All DBs
Position
complement(2712188..2715433)
Genome browser
AA seq
1081 aa
AA seq
DB search
MPRRNDLNKIMILGAGPIVIGQACEFDYSGTQACKALKEEGYEVVLVNSNPASIMTDPEL
ADRTYIEPLIPEIVEKIIEKERPDAVLPTMGGQTALNLAVSLSKSGVLEKYGVELIGAKL
PAIEMGEDRELFKEAMARIGVPVCPSGIASSIEEARQVAHEIGSYPLIIRPAFTLAGTGG
GIAYNQEEYEEMVQYGLDQSPMSQILVEKSLLGWKEYELEVMRDLADNVVIICSIENFDP
MGVHTGDSITVAPAQTLTDKEYQRLRDYSIAIIREIGVETGGSNIQFSVNPANGDVIVIE
MNPRVSRSSALASKATGFPIAKFAAKLAVGYTLNEISNDITKKTPASFEPTIDYVVTKIP
RFAFEKFPGAEPILNTQMKSVGEAMAIGRTFQESFQKALRSLETGRFGFGCDRHETLPTL
SHLRSQLRTPNPERVFSLHHAFNLGMTVEEIHELTAIDPWFLDKLEDLVKTEKYMKQRSL
KDLTAADLRYIKQQGFGDRQIAFATKTTEDEVRAYRKSLGITPVYKVVDTCAAEFEAFTP
YYYSTYEPEECEVLPSDKPKVMILGGGPNRIGQGIEFDYCCCHAAFSLSDAGYETIMVNS
NPETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGIIIQFGGQTPLKLAVPLQKYLNSP
DCPVQTKIWGTSPDSIDTAEDRERFEKILHELEISQPPNGIARDYEESRVVANRISYPVV
VRPSYVLGGRAMEIVYSDEELERYMTYAVQIEPDHPILIDKFLENAIEVDVDSLTDSTGK
VVIGSIMEHIEEAGIHSGDSACSIPYTSLSDNVLTTIRQWTEQLARALNVVGLMNIQYAV
QGDQVYILEANPRASRTVPYVSKATGRPLAKIASLVMSGKTLEELGVTEEFIPQHVAVKE
AVLPFSKFPGADTLLGPEMRSTGEVMGIDSDFGKAFAKAELGAGVILATTGTVFVSMSDR
TKEAAVPVVRELIDLGFKVVATSGTQKVLREHGIEGVEVVLKLHEGRPHVIDWIKNGQIQ
FIINTPSGEESQLDGRTIRRAALDYKLPIITTIAGGKATVAALRSLQDHPLDVKALQDYL
G
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgccacgccgcaacgacttaaacaaaattatgattttgggggctggccccattgttatt
ggtcaagcttgcgaatttgattattcgggcacccaggcgtgtaaggcgttgaaggaagaa
ggttatgaagtggtgttggtaaactccaacccagcatcgatcatgactgacccggagttg
gcggatcgcacctacattgagccgctcattccggaaattgtggaaaaaattattgaaaaa
gaacggccggacgcagttttacccaccatgggggggcaaacggcattgaacctggcggta
tctctgtctaagtccggggtgctggaaaaatatggggtggaattaattggggcgaaactg
ccggcgatcgaaatgggggaagaccgggaattattcaaggaagccatggcccgcattggg
gttcccgtttgtccatcgggcatcgccagtagcatcgaagaagctcggcaggtggcccat
gaaattggttcctatccgttaattattcgccctgcttttacgttggcaggtacggggggc
ggcattgcctacaaccaagaagaatatgaggagatggtgcaatacggcttggatcagtcc
cccatgtcccaaattctggtggaaaaatccctgttgggctggaaggaatacgagctggaa
gtgatgcgggatttggccgataacgtggtcattatctgctccattgaaaactttgacccc
atgggggttcacactggggattccattaccgttgctcccgcccagactttgaccgataag
gaatatcaacggctacgggactattcaattgccattattcgggaaattggcgtggaaaca
ggggggtcaaacattcagttttccgttaacccggccaatggcgatgtgattgtgatcgag
atgaatccccgagtctcccgttcttcggccctggcttctaaggccacgggtttccccatt
gccaaatttgcggccaagttagcagtgggctataccctcaacgaaatttccaacgacatc
actaagaagactcccgcttcctttgaacccaccattgattacgtggtgaccaaaattccc
cgctttgcctttgaaaaattccctggggccgagccaattttaaacacccaaatgaaatcc
gtcggggaagccatggccattggtcgtactttccaagaatctttccaaaaggcgttacgt
tccttggaaacaggacggttcggcttcggttgcgatcgccatgagactttgccgacgctg
tcccatttgcgttcccagttgcggactcccaacccagagcgggtcttttctttgcaccat
gcgtttaatttgggcatgacagtggaagaaattcatgagttgacggcgatcgatccttgg
tttttagacaaactagaggatttggtcaaaacagaaaaatatatgaaacaacggagttta
aaagacctcacggccgcagatctgcgctacatcaaacaacagggctttggcgatcgccag
atagcctttgccaccaaaaccacggaagacgaagtgcgggcctaccgcaaatccttgggc
attacccccgtgtataaagtggtggacacctgtgcggcggaatttgaagccttcaccccc
tactactactccacctacgaaccggaagagtgcgaagtattgccatcggacaaacccaaa
gtgatgatcctggggggggggcccaaccgcattggccaaggcattgaatttgattactgc
tgttgccatgccgccttttccctcagtgatgcgggctatgaaaccatcatggtcaactcc
aacccggaaaccgtttccaccgactacgacacgagcgatcgcctctattttgagccgtta
acgaaagaagacgttttaaatattattgaagcggaaaacccagtgggcatcattatccaa
tttggtggtcaaacgcctttgaaactggcagttcccctgcaaaagtatttaaacagtccc
gattgccccgtgcagactaaaatttggggcacttcccctgactccatcgacaccgctgaa
gaccgggaacgatttgagaagattctccacgagctggaaattagccaacctcccaacggc
attgccagggattatgaagagtccagagtggtggccaaccgcattagttatcccgttgtg
gtgcgcccttcctacgtgctagggggaagagccatggaaatcgtctattccgatgaagaa
ttagaacggtacatgacctatgcggtgcaaattgagccggaccaccccattttaattgac
aagtttctggaaaatgccattgaagtggacgtggactccctcaccgatagcaccggcaaa
gtggtcatcggtagcatcatggaacacatcgaagaagcgggcatccattccggggactcc
gcctgttccattccctacaccagcctttccgataacgttctgaccaccatccgccaatgg
acagaacaattggcccgggccttaaacgtggtgggtctaatgaatattcagtacgcagtg
cagggggaccaggtttatatcctcgaagctaacccccgggcttcccgcaccgttccctat
gtcagtaaagccaccggccgtcctttggccaaaattgcttccctggtcatgtccggcaaa
accctagaagaattaggggtaacggaggaatttattccccaacacgtggccgttaaagaa
gccgttcttcccttcagtaaattccccggggcggatactttgctggggccagaaatgcgt
tccactggggaagtcatgggcattgacagcgactttggtaaagcctttgcgaaggcagag
ttgggagcgggggtaattttagccaccaccggaacggtatttgtgtccatgagcgatcgc
accaaagaggcggcggtgcccgtagtgcgggaattaattgacctgggctttaaggttgtc
gctacctctggtacccaaaaagttctgcgggaacatggcattgaaggggtggaagtggtg
ttaaaactccacgaagggcgaccccacgtcattgactggatcaaaaacggccaaatccaa
tttattatcaacacccccagcggcgaggagtcccagttggatggccgcaccattcgccgg
gctgcgttggattataaattgcccatcatcaccacgatcgccggaggaaaagccaccgtt
gccgccctccgcagtctgcaggatcaccctttagacgttaaagcattgcaggattatcta
ggctag
DBGET
integrated database retrieval system
