KEGG   Synechocystis sp. PCC 6803 GT-S: SYNGTS_2908
Entry
SYNGTS_2908       CDS       T02098                                 
Symbol
slr0551
Name
(GenBank) hypothetical protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
syy  Synechocystis sp. PCC 6803 GT-S
Pathway
syy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:syy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SYNGTS_2908 (slr0551)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:syy03019]
    SYNGTS_2908 (slr0551)
Messenger RNA biogenesis [BR:syy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SYNGTS_2908 (slr0551)
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B RMMBL RNase_J_C Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: BAK51656
LinkDB
Position
3249802..3251724
AA seq 640 aa
MAKNTQTQALKILPLGGLHEIGKNTCVFEYDDEILLLDAGLAFPTDDMHGVNVVLPDMTY
LRENREKIKGMVVTHGHEDHIGGIAYHLKQFDIPIIYGPRLAMALLRDKLEEAGMLERTN
LQTVSPREMVRLGKSFVVEFIRNTHSIADSYCLAIHTPLGVVMHSGDFKIDHTPIDGEFF
DLQKVAEYGEKGVLCLLSDSTNAEVPGITPSEASVIPNLDRVFSQAEGRLMVTTFASSVH
RVNIILSLAQKHQRKVAVVGRSMLNVIAHARKLGYIKCPDNLFVPLKAARNLPDQQQLIL
TTGSQGEPLAAMTRISNGEHPQIKIRQGDTVVFSANPIPGNTIAVVNTIDRLMMQGANVI
YGKHQGIHVSGHASQEEHKMLLALTRPKFFVPVHGEHRMLVKHSQMAQAQGIPSENIVIV
NNGDVIELTGDRIRVAGQVPSGIELVDQAGIVHESTMAERQQMAEDGLVTVAAALSKTGT
LLAYPEVHCRGVVMTIQPKLLEELIVRTIENFLTERWSEFTHGSNGSTEVSWNALQKELE
SSLQRLIKRELQSSPMVLLMLQTDTPIELDQVPQNVSTVSATSATPAPRKKVVLTKTPEP
KVKAKPEKKVVTTAEPSAQPVSTTKVYRRSRKRSTTSVSS
NT seq 1923 nt   +upstreamnt  +downstreamnt
atggctaaaaatactcaaacccaagccctcaaaattcttcccctcggtggcctgcacgaa
attggtaaaaatacctgcgtctttgaatatgacgatgaaattttactgcttgatgcgggg
ctagctttccccaccgacgacatgcacggcgttaatgttgtactgccggacatgacctac
ctgagggaaaaccgggagaaaatcaagggcatggtggttacccacggccacgaagaccac
attggtggcattgcctatcacctcaagcagtttgacattcccattatctacggccctcgg
ttagccatggccctgttacgggacaagctggaggaagccggtatgttggagcgcaccaat
ttgcagaccgtctctccccgggaaatggtgcgtttgggcaaatcctttgtggtggaattt
attcgtaacacccactccatcgccgacagctattgtctagctattcacacacctctgggg
gtagtgatgcacagtggagattttaaaatcgaccacactcccattgacggggaatttttc
gacctgcaaaaggtggcggagtatggcgaaaaaggggtgctctgtttactgagtgactcc
accaatgcggaagtgcctggcattaccccctctgaagcgtctgttatccccaacctggac
cgggttttttcccaggcggaaggccgtttgatggtgaccacctttgcttcttcggtgcac
cgggtcaatatcatcctcagcttggcccaaaaacatcagcggaaagtagcggtggtgggg
cgatcaatgctcaatgttattgcccatgcccgtaaattgggctacatcaaatgccccgat
aacttattcgtgcccctcaaagcagcccgcaatttgcccgaccaacaacaactaattttg
accactggctcccagggagaacctctggcggccatgacccgcatttccaacggtgagcat
ccccagattaaaattcgccagggggatacagtggtcttttccgctaatcccatccccggt
aataccattgcggtggtcaacaccattgatcgcctgatgatgcagggagccaatgtaatt
tacggcaagcatcagggcatccacgtttctggccatgcttcccaggaagaacacaaaatg
ttgttggcccttactcgacctaaattctttgtccccgtccatggggaacaccgtatgttg
gtcaagcattcccagatggcccaggcccagggtattcccagcgaaaatattgttattgtc
aataacggcgatgtaattgaactgaccggcgatcgcatccgggtggcaggacaagttcct
tccggcattgaattggtggatcaagcgggtattgtccatgagagcaccatggctgaacgg
caacaaatggccgaagacggtttggtgacggtggcggcagccctaagtaaaactggcaca
ctgttagcctatcctgaggtacattgccggggtgtggtgatgaccattcagcctaagttg
ttggaagaactaattgtccgcaccatcgagaatttcctcacagaacgctggtcagagttc
acccatggttccaacggctccacagaggttagctggaatgcgctgcaaaaagaattggag
tctagcttgcaacgcctgatcaaacgggaattacagagtagccccatggttttactgatg
ttgcaaaccgacacccccatcgaattggatcaggttccccagaatgtaagcactgtcagt
gcgacttctgctacaccagccccccgcaaaaaagtggtcctgactaaaaccccagaacca
aaagtgaaagctaaaccagaaaagaaagtggtcaccactgccgagcctagcgcccaaccg
gtcagtaccactaaggtttaccgtcgtagccgcaaacgctctaccacttctgtttcttcc
taa

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