Synechocystis sp. PCC 6803 GT-S: SYNGTS_3164
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Entry
SYNGTS_3164 CDS
T02098
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
syy
Synechocystis sp. PCC 6803 GT-S
Pathway
syy03030
DNA replication
syy03430
Mismatch repair
syy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SYNGTS_3164 (dnaE)
03430 Mismatch repair
SYNGTS_3164 (dnaE)
03440 Homologous recombination
SYNGTS_3164 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syy03032
]
SYNGTS_3164 (dnaE)
03400 DNA repair and recombination proteins [BR:
syy03400
]
SYNGTS_3164 (dnaE)
Enzymes [BR:
syy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SYNGTS_3164 (dnaE)
DNA replication proteins [BR:
syy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SYNGTS_3164 (dnaE)
DNA repair and recombination proteins [BR:
syy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SYNGTS_3164 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
DUF2379
Motif
Other DBs
NCBI-ProteinID:
BAK51912
LinkDB
All DBs
Position
3559579..3562272
Genome browser
AA seq
897 aa
AA seq
DB search
MSFVGLHIHSDYSLLDGASQLPALIDRAIELGMPAIALTDHGVMYGAVELLKVCRGKPIK
PIIGNEMYVINGDIEINKRHRRFHQVVLAKNNQGYRNLVKLTTISNLKGIQGSGIFARPC
INKELLEQYKEGLIVTSACLGGEVPQAILKGDLDHARQVAKWYKNLFGDDYYLEIQDHGS
VEDRLVNINLVKIAQELDIKIVATNDSHFISCNDVEAHDALLCIQTGKLITEEKRLRYSG
TEYLKSAEEMHLLFRDHLPDDIIETAIANTLEVADKVEAYSILGEPRIPHYPIPPNHTPE
TYVEDIAWDGLLERLKCRERADITPVYKERLEYELRMLEKMGFCTYFLVVWDYIKYARDH
GIPVGPGRGSAAGSLVAYCMKITNIDPVHHGLIFERFLNPERKSMPDVDTDFCIDRRDEM
IEYVTQKYGEDKVAQIITFNRMTSKAVLKDVARVLDIPYAESDKMAKMIPVSRGKPAKLK
VMISDQTPEPQFKARYDNEPWVKKWIDMAIRIEGTNKTFGVHAAGVVISSEPLDQIVPLQ
KNNDGAVITQYYMEDVEAMGLLKMDFLGLKNLTTLQRAVELVAETKGIELDLDDLPLQER
KALQIRARTGSKKLPDDVKKTHKLLEAGDLEGIFQLESQGMKQIVRDLKPSGIEDISSIL
ALYRPGPLDAGLIPIFINRKHGREEISYQHKLLEPILNETYGVLVYQEQIMKMAQDLADY
SLGEADLLRRAMGKKKAEEMQKHRAKFVDGSTKHGVPSRIAENLFDQMVKFAEYCLSFGT
EILTVEYGPLPIGKIVSEEINCSVYSVDPEGRVYTQAIAQWHDRGEQEVLEYELEDGSVI
RATSDHRFLTTDYQLLAIEEIFARQLDLLTLENIKQTEEALDNHRLPFPLLDAGTIK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgtcggtctccatatccacagcgactatagcctcctggatggggcttcccaa
ttacccgccttgattgaccgggccattgaactgggtatgccggcgatcgccctgacggac
catggggtgatgtatggggcggtggaattgctgaaagtctgccggggcaaaccgattaaa
cccatcattggcaatgaaatgtatgtgataaatggtgacattgaaattaataagcgtcac
cgtcgtttccaccaggtagttttagcgaagaataatcagggttacagaaatttagttaaa
ctcaccaccatttctaacttgaaaggtattcaaggcagcggcatttttgctcgaccttgt
attaacaaagagctgctagaacaatacaaagaagggttgatagttaccagtgcttgtctg
gggggtgaagtgccccaagcaattttaaaaggagatttagaccatgcccgccaagtagct
aaatggtataagaatttatttggcgatgactactatttggaaatccaagaccatggttct
gtggaggaccgtttagttaatattaacttggtcaaaattgcccaggaattagacattaaa
attgttgccaccaacgattcccattttatctcctgcaacgatgtggaggcccatgatgcc
ctcctttgtattcaaacgggtaagttaattactgaagaaaaaagattgcgctacagcggc
acagaatatctcaaatccgccgaagaaatgcatttgctttttcgggatcatttgccggac
gatatcatcgaaacggcgatcgccaacactctggaagtagccgataaagttgaagcctac
agcattctaggggaaccccgcattccccattatcccattccccccaaccatacccctgaa
acctatgtggaagatattgcctgggatggtctgttagaaaggttgaaatgtcgagaaagg
gctgatattactccggtgtacaaagaacggctggaatatgaattaagaatgttagaaaaa
atgggtttttgcacctattttcttgtagtttgggattacattaaatatgcccgagatcat
ggcattcccgtaggaccagggcgaggctcagcagcgggatctttggtggcctattgcatg
aaaatcaccaacattgatccagtacaccatggactaatttttgagcgctttttgaaccca
gaacggaaatctatgcccgatgtagatacggatttttgtattgatcgccgggatgaaatg
attgagtatgttacccaaaagtatggggaagataaggttgcccaaattattacctttaac
cgcatgacttccaaagcggtgcttaaagatgtagctagagtattagatattccctatgca
gaatcggacaaaatggccaaaatgatccctgtttctaggggtaaaccagccaaattaaag
gtgatgatttccgaccaaactccggagccccaatttaaagctcgctatgataatgaacct
tgggtaaaaaaatggatcgatatggccattcgcattgaaggaacgaacaaaaccttcggc
gtccatgctgccggggtggtaatttcttctgaacctttagatcaaattgtgccgttgcaa
aagaataatgatggggcagtaattacccaatattacatggaagatgtggaagccatgggt
ctgttgaaaatggattttttaggcttgaaaaatctgactaccctacagagagcggtggag
ttagtcgcagaaacaaaaggtattgaactagatttggacgacttacctttacaggagcga
aaagccctacagattcgtgcccgcactggttcaaaaaagttacccgacgacgttaaaaag
acccacaaactactagaagcaggggatttagagggaatttttcaattggaatcccagggc
atgaaacagattgtgcgggatttaaaaccatctggcattgaagatatttcatccattttg
gctttataccgccctggaccgttggatgcaggactaattcctattttcattaaccgtaaa
cacggccgggaagaaatttcctatcagcataaacttttagaacccattcttaacgaaacc
tatggagttctcgtgtaccaagagcagatcatgaaaatggctcaggatttagctgattat
tccctaggagaagcggatttgttgcggcgggcgatgggtaaaaagaaagctgaagaaatg
caaaaacatcgggcgaaatttgtcgatggttccactaaacatggagtgccttcccgcatc
gcggaaaatttatttgaccagatggttaagtttgcggaatattgcctcagttttggcacc
gaaattttaaccgttgagtacggcccattgcccattggcaaaattgtgagtgaagaaatt
aattgttctgtgtacagtgttgatccagaagggagagtttacacccaggcgatcgcccaa
tggcatgaccggggagagcaggaagtattggaatatgaattggaagatggttcagtaatc
cgagctacctctgaccaccgctttttaaccaccgattatcaactgttggcgatcgaagaa
atttttgctaggcaactggacttgttgactttagaaaatattaagcaaactgaagaagct
cttgacaaccatcgtcttccctttccattacttgacgctgggacaattaaataa
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