Synechocystis sp. PCC 6803: MYO_111540
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Entry
MYO_111540 CDS
T02468
Symbol
gyrB
Name
(GenBank) DNA gyrase B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
syz
Synechocystis sp. PCC 6803
Brite
KEGG Orthology (KO) [BR:
syz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syz03032
]
MYO_111540 (gyrB)
03400 DNA repair and recombination proteins [BR:
syz03400
]
MYO_111540 (gyrB)
Enzymes [BR:
syz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MYO_111540 (gyrB)
DNA replication proteins [BR:
syz03032
]
Prokaryotic type
DNA Topoisomerases
MYO_111540 (gyrB)
DNA repair and recombination proteins [BR:
syz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MYO_111540 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Intein_splicing
HATPase_c
Toprim
HNH_3
HATPase_c_3
GerD
Hint
DUF6353
Motif
Other DBs
NCBI-GeneID:
14616576
NCBI-ProteinID:
AGF51408
LinkDB
All DBs
Position
complement(1262798..1266034)
Genome browser
AA seq
1078 aa
AA seq
DB search
MTMTTTNYGADQIQVLEGLEPVRKRPGMYIGSTGPKGLHHLVYEVVDNAIDEALAGYCTH
IEIDINADGSVTVVDNGRGIPTDIHPTTGRSALETVLTVLHAGGKFGGGGYKVSGGLHGV
GVSVVNALSEWVEVKVWRQGKEHFQRFERGNPIGTLEATPNEGHSTGTQVSFLPDTQIFK
DGIEFDYHTLASRLKELAYLNAGVRITFGDRRADSLKEEQFYYEGGIREYVTYMTTDKTP
LHEEIIYTSGEKNDVQVEVALQWCVDAYSDTLLGFANNIRTIDGGTHLEGLKAVLTRTLN
SVARKRNKLKDGDSNLGGENIREGLTGVISVKVPDPEFEGQTKTKLGNTEVRGIVDTLVG
EALTEFLEFNPGVADAIIEKAVQAFKAAEAARRARELVRRKSVLESSTLPGKLADCSSKD
PSESEIFIVEGDSAGGCFSGDTLVALTDGRSVSFEQLVEEEKQGKQNFCYTIRHDGSIGV
EKIINARKTKTNAKVIKVTLDNGESIICTPDHKFMLRDGSYKCAMDLTLDDSLMPLHRKI
STTEDSGITIDGYEMVWSPRSDSWLFTHLVADWYNRWQGIYIAEEKQHCHHKDFNKRNNN
PDNLIRLSPEKHLALHRKHISKTLHRPDVVEKCRRIHQSPEFRRKMSARMQSPETRAILS
KQAQAQWQNETYKLTMMESWRSFYDSNEDYRQQNAEQLNRAQQEYWAQAENRTAQAERVR
QHFAQNPGLRQQYSENAVKQWNNPELLKWRQKKTKEQWTPEFREKRREALAQTYYRKTLA
ALKQVEIENGYLDISAYDSYRISTKDKSLLRFDRFCERYFENDENLAREAVLNYNHRIVN
IEAVSETIDVYDIEVPHTHNFALASGVFVHNSAKQGRDRRFQAILPLRGKILNIEKTDDA
KIYKNTEIQALITALGLGIKGDDFDISSLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQR
DLVDQGYIYIACPPLYKLERGKNHFYCYSDRELQEQISQFPPNANYTIQRFKGLGEMMPQ
QLWDTTMNPESRTMKRVHIEDAAEADRIFTVLMGDRVAPRREFIETYGTKLDLTDLDI
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatgacgaccacgaactacggtgccgatcaaattcaagtcttggaagggttggaa
ccagtccgtaagcgcccagggatgtatattggctccacggggcccaagggtctgcatcac
ctagtgtatgaagtggttgacaatgccattgatgaggctttggccggctattgtacccat
attgaaattgacattaatgccgacggttccgtcaccgtagtggacaatggccgggggatt
cccaccgatattcaccccaccaccgggcgatcggccttggaaacagtgttgacggtactc
catgccgggggcaagtttgggggcggtggctataaggtatccggtggtttgcacggggta
ggggtttccgttgttaacgccctgtccgaatgggtggaagtgaaggtttggcgccagggg
aaggaacacttccagcggtttgagcggggcaatcccattggcacgctagaagctacccca
aacgaagggcactccacaggaacccaggtttcttttttgccagacacccagatttttaag
gatggcatcgagtttgattaccataccctggccagtcgtctcaaggagttggcctacctc
aacgctggggttcgcattacctttggcgatcgccgggcggattccctcaaagaagagcag
ttttattatgaagggggcattagggaatatgtcacctatatgaccacggacaaaaccccg
ctccacgaggaaattatttacacttccggggaaaaaaatgacgtccaggtggaggtggcc
ctccagtggtgtgtggatgcgtatagtgatactctcttgggatttgccaacaatatccgc
actattgatggtggcacccatttagaaggtctaaaagcggttttaacccgtactctcaac
tccgttgcccgtaagcgcaataagttaaaggatggcgatagtaatttagggggagaaaat
attcgtgagggcctaaccggcgttatttccgttaaagtaccggacccagaatttgaagga
caaaccaaaactaaattgggcaacacggaagtccggggcattgtggataccttggtgggg
gaagctctaacggaatttttagaatttaatcctggggttgccgatgccatcattgaaaaa
gcagtgcaggcttttaaagcagcggaagcagcccgtcgagccagggaattagtacgccgt
aaatcagttttagagtcttcaactttaccgggtaaattggcagactgtagctccaaagat
ccctcggaatcggaaattttcatcgtggaaggagactctgccggcggctgtttttctgga
gatacattagtcgctttaactgatggtcgtagcgttagctttgagcaattggttgaagaa
gaaaaacaaggaaaacaaaacttttgttataccatccgccatgatggttctataggggtt
gaaaaaatcatcaatgcccgcaaaacaaaaactaatgcgaaggtaatcaaggttacgttg
gacaatggtgagtctattatttgcaccccggatcataaattcatgttgcgggatgggagc
tacaaatgtgcgatggatttaactctcgatgattcgttaatgccgttacaccgaaaaatt
tcgactacggaagattctggtattacaattgatggctatgaaatggtttggagtccccgt
tccgatagctggctatttacccatttagttgcagactggtataatcgttggcagggaatt
tatattgcagaagaaaaacaacattgccatcacaaagactttaataagcggaataataat
cccgataatttaattcgcttatcccctgaaaaacatttagcgcttcaccgtaagcacatt
agtaaaacattacatcgccctgatgtggtagagaaatgtcgtcgaattcaccaaagtcct
gagtttcgacggaaaatgagcgcaaggatgcaatcaccggaaacacgggcaattttgtcc
aaacaggcccaggcccaatggcaaaatgaaacctataaattaacaatgatggaaagttgg
cgtagtttctacgacagtaatgaggattatcgtcagcaaaatgcagaacagctaaatcgt
gctcaacaggaatattgggcgcaggcggagaatcgtactgctcaagcagaaagggtacgt
caacatttcgcacaaaatcctggattacgacaacaatattcagagaatgcggttaaacaa
tggaataatcccgaattgttgaaatggcgacagaaaaaaacaaaggaacaatggactcct
gaatttcgagaaaaacgtcgagaagctctggcccaaacctattaccgcaaaactctagcg
gcactaaaacaagttgagatcgaaaatggttatttagacatatctgcttacgatagctat
cgaatttcgactaaagataaatccttgttacgttttgatcgattctgtgaacggtatttc
gagaatgatgagaacctcgcaagggaagcagtattaaattacaatcacagaattgtaaat
attgaagctgtgtcagaaacaatcgatgtttatgatattgaggttccccacacccacaat
tttgctttggcaagcggagtgtttgtccataacagcgcaaaacaaggtcgagaccgtcgt
ttccaagcaattttgcctttacggggcaagattttaaatattgaaaaaactgacgatgcc
aagatttataaaaatactgaaattcaagccttaattacagcattaggtctgggcattaaa
ggtgatgattttgacatatcttccctccgctatcacagagtagtaattatgaccgatgct
gatgtagatggagcgcacatacgcactcttttgttgactttcttctaccgttatcagcgg
gatttggtggaccaaggctacatttacattgcctgtccgccgttgtacaaactggagcgg
ggtaaaaaccatttctattgttattccgaccgggaattgcaggagcaaatcagtcagttt
ccccccaatgctaattacaccatccagcgttttaaaggtttaggggaaatgatgccccaa
caactctgggataccacgatgaatcctgaaagccgcaccatgaaacgtgtccacattgaa
gatgccgctgaagccgatcgcatttttacggtgttgatgggcgatcgggtagctccccgc
cgggaattcatcgaaacctatggcaccaagttggatctaactgacttggatatctag
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