Synechocystis sp. PCC 6803: MYO_132000
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Entry
MYO_132000 CDS
T02468
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
syz
Synechocystis sp. PCC 6803
Pathway
syz03030
DNA replication
syz03430
Mismatch repair
syz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MYO_132000 (dnaE)
03430 Mismatch repair
MYO_132000 (dnaE)
03440 Homologous recombination
MYO_132000 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syz03032
]
MYO_132000 (dnaE)
03400 DNA repair and recombination proteins [BR:
syz03400
]
MYO_132000 (dnaE)
Enzymes [BR:
syz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MYO_132000 (dnaE)
DNA replication proteins [BR:
syz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MYO_132000 (dnaE)
DNA repair and recombination proteins [BR:
syz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MYO_132000 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
DUF2379
Motif
Other DBs
NCBI-GeneID:
14618625
NCBI-ProteinID:
AGF53419
LinkDB
All DBs
Position
3558037..3560730
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AA seq
897 aa
AA seq
DB search
MSFVGLHIHSDYSLLDGASQLPALIDRAIELGMPAIALTDHGVMYGAVELLKVCRGKPIK
PIIGNEMYVINGDIEINKRHRRFHQVVLAKNNQGYRNLVKLTTISNLKGIQGSGIFARPC
INKELLEQYKEGLIVTSACLGGEVPQAILKGDLDHARQVAKWYKNLFGDDYYLEIQDHGS
VEDRLVNINLVKIAQELDIKIVATNDSHFISCNDVEAHDALLCIQTGKLITEEKRLRYSG
TEYLKSAEEMHLLFRDHLPDDIIETAIANTLEVADKVEAYSILGEPRIPHYPIPPNHTPE
TYVEDIAWDGLLERLKCRERADITPVYKERLEYELRMLEKMGFCTYFLVVWDYIKYARDH
GIPVGPGRGSAAGSLVAYCMKITNIDPVHHGLIFERFLNPERKSMPDVDTDFCIDRRDEM
IEYVTQKYGEDKVAQIITFNRMTSKAVLKDVARVLDIPYAESDKMAKMIPVSRGKPAKLK
VMISDQTPEPQFKARYDNEPWVKKWIDMAIRIEGTNKTFGVHAAGVVISSEPLDQIVPLQ
KNNDGAVITQYYMEDVEAMGLLKMDFLGLKNLTTLQRAVELVAETKGIELDLDDLPLQER
KALQIRARTGSKKLPDDVKKTHKLLEAGDLEGIFQLESQGMKQIVRDLKPSGIEDISSIL
ALYRPGPLDAGLIPIFINRKHGREEISYQHKLLEPILNETYGVLVYQEQIMKMAQDLADY
SLGEADLLRRAMGKKKAEEMQKHRAKFVDGSTKHGVPSRIAENLFDQMVKFAEYCLSFGT
EILTVEYGPLPIGKIVSEEINCSVYSVDPEGRVYTQAIAQWHDRGEQEVLEYELEDGSVI
RATSDHRFLTTDYQLLAIEEIFARQLDLLTLENIKQTEEALDNHRLPFPLLDAGTIK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgtcggtctccatatccacagcgactatagcctcctggatggggcttcccaa
ttacccgccttgattgaccgggccattgaactgggtatgccggcgatcgccctgacggac
catggggtgatgtatggggcggtggaattgctgaaagtctgccggggcaaaccgattaaa
cccatcattggcaatgaaatgtatgtgataaatggtgacattgaaattaataagcgtcac
cgtcgtttccaccaggtagttttagcgaagaataatcagggttacagaaatttagttaaa
ctcaccaccatttctaacttgaaaggtattcaaggcagcggcatttttgctcgaccttgt
attaacaaagagctgctagaacaatacaaagaagggttgatagttaccagtgcttgtctg
gggggtgaagtgccccaagcaattttaaaaggagatttagaccatgcccgccaagtagct
aaatggtataagaatttatttggcgatgactactatttggaaatccaagaccatggttct
gtggaggaccgtttagttaatattaacttggtcaaaattgcccaggaattagacattaaa
attgttgccaccaacgattcccattttatctcctgcaacgatgtggaggcccatgatgcc
ctcctttgtattcaaacgggtaagttaattactgaagaaaaaagattgcgctacagcggc
acagaatatctcaaatccgccgaagaaatgcatttgctttttcgggatcatttgccggac
gatatcatcgaaacggcgatcgccaacactctggaagtagccgataaagttgaagcctac
agcattctaggggaaccccgcattccccattatcccattccccccaaccatacccctgaa
acctatgtggaagatattgcctgggatggtctgttagaaaggttgaaatgtcgagaaagg
gctgatattactccggtgtacaaagaacggctggaatatgaattaagaatgttagaaaaa
atgggtttttgcacctattttcttgtagtttgggattacattaaatatgcccgagatcat
ggcattcccgtaggaccagggcgaggctcagcagcgggatctttggtggcctattgcatg
aaaatcaccaacattgatccagtacaccatggactaatttttgagcgctttttgaaccca
gaacggaaatctatgcccgatgtagatacggatttttgtattgatcgccgggatgaaatg
attgagtatgttacccaaaagtatggggaagataaggttgcccaaattattacctttaac
cgcatgacttccaaagcggtgcttaaagatgtagctagagtattagatattccctatgca
gaatcggacaaaatggccaaaatgatccctgtttctaggggtaaaccagccaaattaaag
gtgatgatttccgaccaaactccggagccccaatttaaagctcgctatgataatgaacct
tgggtaaaaaaatggatcgatatggccattcgcattgaaggaacgaacaaaaccttcggc
gtccatgctgccggggtggtaatttcttctgaacctttagatcaaattgtgccgttgcaa
aagaataatgatggggcagtaattacccaatattacatggaagatgtggaagccatgggt
ctgttgaaaatggattttttaggcttgaaaaatctgactaccctacagagagcggtggag
ttagtcgcagaaacaaaaggtattgaactagatttggacgacttacctttacaggagcga
aaagccctacagattcgtgcccgcactggttcaaaaaagttacccgacgacgttaaaaag
acccacaaactactagaagcaggggatttagagggaatttttcaattggaatcccagggc
atgaaacagattgtgcgggatttaaaaccatctggcattgaagatatttcatccattttg
gctttataccgccctggaccgttggatgcaggactaattcctattttcattaaccgtaaa
cacggccgggaagaaatttcctatcagcataaacttttagaacccattcttaacgaaacc
tatggagttctcgtgtaccaagagcagatcatgaaaatggctcaggatttagctgattat
tccctaggagaagcggatttgttgcggcgggcgatgggtaaaaagaaagctgaagaaatg
caaaaacatcgggcgaaatttgtcgatggttccactaaacatggagtgccttcccgcatc
gcggaaaatttatttgaccagatggttaagtttgcggaatattgcctcagttttggcacc
gaaattttaaccgttgagtacggcccattgcccattggcaaaattgtgagtgaagaaatt
aattgttctgtgtacagtgttgatccagaagggagagtttacacccaggcgatcgcccaa
tggcatgaccggggagagcaggaagtattggaatatgaattggaagatggttcagtaatc
cgagctacctctgaccaccgctttttaaccaccgattatcaactgttggcgatcgaagaa
atttttgctaggcaactggacttgttgactttagaaaatattaagcaaactgaagaagct
cttgacaaccatcgtcttccctttccattacttgacgctgggacaattaaataa
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