KEGG   Synechocystis sp. PCC 6803: MYO_18840
Entry
MYO_18840         CDS       T02468                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
syz  Synechocystis sp. PCC 6803
Pathway
syz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:syz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MYO_18840 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:syz03400]
    MYO_18840 (uvrA)
DNA repair and recombination proteins [BR:syz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MYO_18840 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MYO_18840 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 RsgA_GTPase nSTAND1 AAA_23 NACHT AAA_21 AAA_22 AAA_33 AAA_18 nSTAND3 AAA_25 Viral_helicase1 DnaJ_CXXCXGXG RNA_helicase cobW MeaB FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 14616306
NCBI-ProteinID: AGF51141
LinkDB
Position
962543..965455
AA seq 970 aa
MPEQNSIRIRGARQHNLKNVNLDLPRDRLIVFTGVSGSGKSSLAFDTIFAEGQRRYVESL
SAYARQFLGQLDKPDVDSIEGLSPAISIDQKSTSHNPRSTVGTVTEIYDYLRLLFGRAGS
PHCPHCQRNIAPQTIDQMCDRVMELPDRTKFQILAPVVKGKKGTHVQLLSSLVSQGFVRV
RINGEVRELSDNIELKKNQAHTIEIVIDRLIKKEGLQERLVDSLSTCLKQAEGTAIIDIL
DKPTLAVLDGGKKDDKEALKAAENGQAYHAELPKEIIFSENFACPEHGAVMDELSPRLFS
FNSPYGACPDCHGIGFVRSFCPDLVIPDPEKPVYVAIAPWSEKDNSYYLSLLYSLGQHFD
FQLQTPWKKLTKEQKEIILYGTEEEIWFEGESRYRNKQGYYRRFAGALNILQKNYDETNS
DAIKQKLEKYIINQPCHTCGGKRLKPEALAVKLGQYNINNLTSVPIRQTLERIENLELTS
RQAMIGELALKEIKARLQFLLDVGLDYLTLDRAAMTLSGGEAQRIRLATQIGSGLTGVLY
VLDEPSIGLHQRDNNRLLATLTKLRDLGNTLIVVEHDEDTIRHADYIVDIGPKAGIHGGE
IVCQGDFQTLLKNQRSLTGAYLSGREAIATPEERRNGNGAKLTLQGCCHNNLRNIDVTIP
LGKLVCVTGVSGSGKSTLVNELLHPALQHYLSRQVAFPKNLGEITGLQAIDKVIVIDQSP
IGRTPRSNPATYTGIFDSIREIFTQTIEAKARGYKPGQFSFNVKGGRCEACAGQGVNVIE
MNFLPDVYVQCDVCKGARYNRETLQVKYKGHSIADVLAMTTEEALTVFENIPRAVNRLQT
LVDVGLGYIKLGQPAPTLSGGEAQRVKLASELSRRATGKTLYLIDEPTTGLSFYDVHHLL
NVLQRLVDKGNSVLVIEHNLDVIRCSDWIIDLGPEGGDRGGKIMVAGTPETVAQHPSSYT
GKYLAKVLQS
NT seq 2913 nt   +upstreamnt  +downstreamnt
atgcccgaacaaaatagcatccgtattcgaggcgctagacaacataacctaaaaaatgtg
aatctagacctgccccgcgatcgcctgattgtgtttacgggggtgtcggggtcaggcaaa
tcttccctagcttttgacactatctttgcagagggacaacggcgttatgtggaatccctc
agtgcttacgcccgacagtttttggggcagttggataagcctgatgtggacagcatcgaa
gggttgagtccggctatttccatcgatcagaaatccacttcccacaatccccgctccacc
gtgggtacggtaacggaaatttacgactacctccgtctgttatttggcagggctggcagt
ccccattgtccccactgccaacggaatattgccccccaaaccattgaccaaatgtgtgat
cgggtgatggagttaccggacagaactaagtttcaaattcttgctccggtggtaaagggc
aaaaaagggacccatgtgcaactactttctagcttagtttcccaaggctttgtgcgggta
agaattaacggcgaagtgcgagaattaagtgacaatattgaattaaaaaagaaccaagcc
cacaccattgaaatagttattgatcgcctgatcaaaaaagaaggtttacaggaacgattg
gtagactcactcagtacttgtttgaagcaagcagaaggcaccgccattattgacattttg
gacaagccaacgctggcagtgttagatggaggtaaaaaagacgacaaagaagcattaaaa
gcggcagaaaacggccaggcttaccatgcagagttacccaaggaaattatcttttcagaa
aactttgcctgtccagaacatggggcggtgatggatgaactttccccccgcttattttct
ttcaactccccctacggtgcttgtcccgattgccatggaattggctttgtgcggtctttt
tgcccagatttggtcattcctgatcccgaaaaaccagtgtatgtggcgatcgccccctgg
tcagaaaaagataattcctattacttgtcgttactgtacagtttaggacagcattttgat
tttcagttacaaactccctggaaaaagctaaccaaagagcaaaaggaaataattttatac
ggcacagaagaagaaatttggtttgaaggggaatcccgttaccgcaataaacaaggttat
tatcgtcgttttgctggagcattaaatatcctgcaaaaaaattatgatgaaaccaattcc
gatgccattaagcaaaagttagaaaaatatattattaatcaaccctgtcacacctgtggc
ggcaaaaggttaaagccagaagcattagcagtaaaactagggcagtacaacattaacaat
ttaaccagtgtgcccatccgccagaccctggaacggattgaaaatctagagttgacttcc
cggcaagccatgattggggaattggcgttaaaggaaatcaaagcccgtttgcaatttctc
ctggacgtaggtttggattatctgaccctcgaccgggccgccatgactctatctggcgga
gaagcccaacggattcgcctggccacccaaattggttccggtctcaccggagttttatac
gttttggatgaaccaagcattggtttgcatcaacgggacaacaatcgcctgttggccact
ctgactaagttaagggatctgggcaatacgttaattgtggtggagcatgatgaagatact
atccgccacgccgattatattgttgacattggtccgaaggcgggcatccatggtggagaa
attgtctgtcagggggattttcagactctactaaaaaatcaaaggtctcttactggggct
tacctatccggtcgggaggcgatcgccactccggaggaacggagaaatggcaacggagcc
aagttaaccctccaaggttgttgccataataatttgcgtaatattgatgtgaccattccc
ctgggcaaactggtgtgtgttacaggggtatccggttccggcaagtccaccctagtcaat
gaattgctccatccggctctgcaacattatctttctcgccaagtagcttttcccaagaat
ttaggggaaatcaccggcctccaggcgatcgataaagtcattgtcattgaccaatccccc
attggccgcactccccgctccaaccccgccacctatacaggtatttttgactccattcga
gaaattttcacccaaaccattgaagctaaagctaggggttataagccgggacaattttct
ttcaacgtcaaagggggacgctgtgaagcctgcgctggtcagggagttaacgtgattgaa
atgaattttttgcccgatgtgtatgtgcaatgtgatgtgtgcaaaggagccagatataac
cgggaaacgttgcaggtgaagtataaaggtcattccattgccgatgtgttggccatgacc
accgaggaagccctgacagtgtttgagaatattcccagggcagtaaatcgcctgcaaacc
ttggtagatgtgggtttgggttacatcaaactgggtcaaccggcccccactttatccggg
ggagaagcccaacgggtcaaactagcttccgagttatctcgccgggccacgggcaaaact
ttgtatttaattgatgaacccaccaccgggctatctttttatgatgtccaccatttgctc
aacgttttgcaaagactagtggataaaggcaattctgttttagtcattgaacataacctg
gatgtaatccgctgtagcgattggattattgatctgggccccgaaggtggcgatcggggt
ggaaaaattatggttgcaggaaccccggaaacagtggcgcaacatccaagttcttacaca
gggaaatatttagcgaaggtattgcaatcttaa

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