Synechocystis sp. PCC 6803: MYO_19920
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Entry
MYO_19920 CDS
T02468
Symbol
recJ
Name
(GenBank) single-strand-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
syz
Synechocystis sp. PCC 6803
Pathway
syz03410
Base excision repair
syz03430
Mismatch repair
syz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MYO_19920 (recJ)
03430 Mismatch repair
MYO_19920 (recJ)
03440 Homologous recombination
MYO_19920 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syz03400
]
MYO_19920 (recJ)
DNA repair and recombination proteins [BR:
syz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MYO_19920 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MYO_19920 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MYO_19920 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-GeneID:
14616414
NCBI-ProteinID:
AGF51247
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Position
complement(1082092..1084371)
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AA seq
759 aa
AA seq
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MAQFRWQLIPPVTPPAIFVEQVRRHCGQSSGQFAAQLLWQRGIQSADQLGGFLSPDCYTP
TSPWEFGQEMKWAVQRLGQAMAQKEKVTIWGDFDADGITSTAVLWEGLGQFFPQDSQLTY
TIPNRLRESHGLNRPGLERLATQGTKLIVTCDTGSTNLDEIVYAQQLGMDVIVTDHHTLP
DDRPEVVAIINPRYFADGHPLFNLSGVAVAFKLVEALYNQYPTVPQQPLEDLLDLVAIGL
IADLVTLQGDCRYLAQRGIAQLRTQKDPATATRPGIHALLNLCNRNGDRPTDIGFGIGPR
INAISRIKGDASFGVELLTSRDTKVCNQLAAEAETLNSRRKGLQKSVIIEIDQRLQNIDL
STTGVVVLTDPQWPTGVLGLAASHVAQTCGRPAILLNTQDGKIAKGSARSVANIDLYALL
HSQRHLMLGFGGHPFAAGLSLPLDKLPLFTEAVNQQFWQSYGAQISLDPILAVDLQVKVA
DLGQDLFREFNLLEPYGMGNPAPKLLLENVQVGRPSFRNIKDRTGNKVSYLKTSFRVTDY
PPKTDDDGQVVQCPGVWWGHHPDELPQNEPLDLVVELDFNTYDRQYEVRLIDFRLHQPQG
IAPSQTSTNLIDRRSPHAPDQDLSPQGHVLRTCPSSWSELRRAYQQAIAAQQPLVLDYHF
LPQCPSSLVAELEAQWHGRETAQLSPLSLQKQWDFSHGLASQILVLIQEYGPALNSGSAW
PKALVRQIETLIAEEQFQKQYFSQVSLTPELLATVPDKP
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggcccaatttcgttggcagttaattccccctgttactcccccggctatttttgtcgaa
caggtgcgtcgccattgtggccaatccagcggtcaatttgccgcccaattactgtggcaa
aggggcattcagtcagcggatcagttgggtgggtttctttccccggattgttatactccc
accagcccttgggaatttggccaggaaatgaaatgggctgtacaaaggttgggccaggcc
atggcccagaaggaaaaagtcaccatttggggggatttcgatgccgacggcattacttcc
actgcagtgttatgggaaggattggggcaattttttccccaggatagccagttgacctac
accatccctaaccgtttacgggagtcccacggcctcaaccgaccgggactagaacgctta
gcaacccagggtacaaagttaattgtcacctgcgacactggcagtacaaatttggacgaa
attgtctatgcccagcagttgggcatggatgtaattgtcaccgaccaccatacgttgcca
gacgatcgcccggaggtggtggccattattaacccccgttactttgccgatggccatccc
ctgtttaacctttccggagtagcagtggcttttaagttggtggaagctctctacaaccaa
tatcccacagtgccccaacaacccttggaggatttactagatttagtggcgatcggtcta
attgccgatttggttaccctgcaaggtgattgtcgttacctagcccaacggggcattgcc
caactccgtacccaaaaagatccagccactgccacccgccctggcatccatgccctactt
aacctttgcaatcgcaacggcgatcggcccacagacattggttttggtattggcccccgc
atcaacgccatcagtcgcattaaaggggatgctagctttggagtagaactactcaccagt
cgggacacaaaagtttgtaaccaattggcggccgaagcggaaaccctcaacagtagacgc
aagggattacagaaatctgtcattatcgaaattgaccaacgactccaaaacattgaccta
tccaccaccggggtagtagtactcaccgatccccagtggcctacaggggttttgggccta
gccgccagtcatgtagcccaaacctgtggccgtccggccattttgctcaacacccaagat
gggaaaattgccaaaggatcagcccgttctgtggccaacattgacctttatgccctactg
cacagtcaacgacatttaatgctgggctttggaggccatccctttgccgccggtttgagc
ttgcctttggataaattgccgttgttcacggaagcggtcaatcaacagttttggcaaagc
tacggagcccagatcagcttggatccgattctggcagtggatctccaagtgaaggtggca
gatttaggacaggacctctttcgggaatttaatttgcttgaaccctatggcatgggtaac
cccgcacccaaactactactggaaaatgtgcaagtcgggaggcccagctttcgcaatatc
aaagaccgcactggtaataaagtgtcctacctaaaaaccagctttcgggtaacggactat
ccgcctaaaaccgatgacgatggccaagttgttcaatgccctggggtttggtggggccac
catcccgatgaactgccccaaaatgaaccgttggatctggtggtggaattagacttcaac
acctacgaccggcagtatgaagtgcgcctgatcgatttccgcttacatcaaccccaagga
attgcccctagtcaaactagtaccaatttaattgaccgccgttccccccatgccccagac
caggatctttctccccaaggtcatgtcctccgcacctgtcccagcagttggtcagaattg
cgccgggcctaccaacaggcgatcgccgcccagcaacccctagtgttggattatcatttc
ttaccccaatgccctagtagcttagtggccgaactagaagcccaatggcatgggcgggaa
acggcccaactttctcccctcagcttgcaaaaacaatgggattttagccatggcttagca
agtcaaattctggtcctaatccaagagtacggcccagcgttaaactcaggcagtgcttgg
ccgaaagctttggtccgccaaattgaaactttaattgcagaagaacaattccaaaagcaa
tatttcagccaggtgtccctaacccccgagcttttggccaccgtacccgacaagccatga
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