Siansivirga zeaxanthinifaciens: AW14_01085
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Entry
AW14_01085 CDS
T03699
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sze
Siansivirga zeaxanthinifaciens
Pathway
sze03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AW14_01085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sze03021
]
AW14_01085
03400 DNA repair and recombination proteins [BR:
sze03400
]
AW14_01085
Enzymes [BR:
sze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AW14_01085
Transcription machinery [BR:
sze03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AW14_01085
DNA repair and recombination proteins [BR:
sze03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AW14_01085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AJR02442
UniProt:
A0A0C5W851
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All DBs
Position
complement(223840..224832)
Genome browser
AA seq
330 aa
AA seq
DB search
MAVFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRIE
GVDHEFSAISGVVEDVTEIILNLKQARFKRQIEDIDNESISISISGQEQITAGDFQKFIS
GFQVLNTELVICNLDPKVNFNMEITIEKGRGYVPAEENKKAAAPIGTIFTDSIYTPIKNV
KYSIENYRVEQKTDYEKLVFEIITDGSITPQDALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLIDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVNVKGLNFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatttaattttcaaaaaccagacaaggtaatcatgattgattctactgatttc
gaaggaaaattcgaattcagacctttagaaccaggttatggtttaacagtaggtaatgca
ttaagaagagtattattatcctctttggaaggttttgctattacatcagtaagaatagaa
ggagtagatcatgagttttcagccatatctggagttgtagaagacgttacagaaattatt
cttaatctgaaacaagctcgttttaaaagacaaattgaagatattgataacgaatcaatt
tcaatttcaatttcaggacaagagcaaattacggctggagattttcaaaaatttatctca
ggatttcaagtattaaatacagaattagttatctgtaatttagatcctaaggttaatttt
aatatggaaattaccattgaaaaaggtagaggctatgttcctgctgaagaaaacaaaaaa
gcggcagcaccaataggaactatttttaccgattctatttacacgccaattaaaaacgtt
aaatatagtattgaaaactatcgtgtagagcaaaaaactgattatgaaaaattagttttt
gaaatcattacagatggttcaattacaccacaagatgctttaactgaagcagctaaaacc
ttaattcatcacttcatgttattctctgatgagcgtatcactttagaagccgatgaaatt
gctcaaactgaaacatatgatgaagaatctttacatatgagacagttgcttaaaacaaag
ttaatcgatatggacttatctgttcgtgcacttaactgtttaaaagcggcagaagttgat
actctaggagacttagtatcatttaacaaaaatgatttaatgaaattcagaaactttggt
aaaaaatctttaactgagcttgaagagcttgtaaatgttaaaggtttaaatttcggaatg
gatttaagcaaatataaattagataaagattaa
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