Siansivirga zeaxanthinifaciens: AW14_02090
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Entry
AW14_02090 CDS
T03699
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sze
Siansivirga zeaxanthinifaciens
Pathway
sze03030
DNA replication
sze03430
Mismatch repair
sze03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AW14_02090
03430 Mismatch repair
AW14_02090
03440 Homologous recombination
AW14_02090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sze03032
]
AW14_02090
03400 DNA repair and recombination proteins [BR:
sze03400
]
AW14_02090
Enzymes [BR:
sze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AW14_02090
DNA replication proteins [BR:
sze03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AW14_02090
DNA repair and recombination proteins [BR:
sze03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AW14_02090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
DUF6824
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AJR02610
UniProt:
A0A0C5WIS9
LinkDB
All DBs
Position
complement(434345..438733)
Genome browser
AA seq
1462 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDTDNWPRCIQIAWQLHDAMGNCIESQDYLVQPDGFNIPY
DAEKIHGISTELAQEEGIPLLEVLEKFKTALGKAKFVVGQNVKFDLNIMGAEFVRESIKN
NLQELPVLDTCTEHTAELCQIPGGRYGKFKLPTLTELHEFLFKEPFAEAHNATADVEATT
RCFLELIRLEEFTQEQLDVAPDYFEKFKEANPSEIQLIGLKHINLKQESAKIREQLKKSE
GVKISSAEIKQNISELEEVEFVHLHNHSQFSVLQSTMSVADIVEAAAEHHMPAVALTDHA
NMMGAFHFVNAVDRHNGSVAGKIAAAKERGETIPDKPIKPIIGCEFFVCEDHTDKTRKDN
GYQIVFLAKNKNGYHNLAKLSSEAFVNGFYYVPRIDKTLIEKYKDDLIVLTGNLYGEVPS
KVLNVGENQAEEALLWWKAQFGDDLYVELMRHNQEDENRVNPTLIELARKHDVKLVASNN
TYYRKKQDANAHDILLCVKDGEKQATPIGRGRGYRYGMPNQDYYFKSGEEMKTLFKDVPE
AISNIQEIIDKVEAYKLAREVLLPAFDIPEEFRHEADLVDGGKRGENTFLRHLTYEGAKK
RYGDPLSDEVVERLDFELSVIENTGYPGYFLIVEDFIREARNMDVSVGPGRGSAAGSVVA
YCLWITNIDPLKYDLLFERFLNPDRISMPDIDIDFDDEGRSRVMDYVIKKYGSNQVAQII
TYGTMAAKSSIRDTARVLDLPLFDADRIAKLIPTMSKLNKIFGLSEKELSSKFRAEDLEK
VNELLNIAEGSGLEAETLNLARILEGSVRNTGIHACGVIITPDDITKFVPVATAKDSDLY
VTQFDNSIVESAGLLKMDFLGLKTLTLIKDTVKIVKARHGILLDPDNFPLDDEETYALFQ
RGETVGVFQYESPGMQKHLRDLKPTVFEDLIAMNALYRPGPMEYIPSFVRRKHGEEEIEY
DLPAMEEYLKETYGITVYQEQVMLLSQSLAGFTKGEADVLRKAMGKKQIAVLDKMKPKFI
EQASANGHDAKVLEKVWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLS
NNMNDIKQVTFFMEECKRMKLDVLGPDVNESFYKFSVNKNNAVRFGMGAIKGVGHGAVMT
IVENRKKDGPYKSIFDLAKRIDLRAANKKAFENLALAGGFDGFKDTHRAQYFHDDGDGIT
FLEKAIRYGNKHQENENSAQVSLFGDASDVQIAEPQVPPCEDWGTMEKLSKEKEVVGIYI
SGHPLDDFRIEMNTFCNANISMFANLEPYVNRELVFGGVITDVQHRVSKQGKGWAMFTIE
DYNDSFEFRIFGEEYLKFRHFLMNNNFVFVKSFIREGWVNKDTGKKSEPRLQFNSFQLLH
DVMENYAKKLSIQIDIDDLKQDKILKLKDLIQMHPGNQSLHFIVYDNKDQIKLTMPSRRQ
KVKVSQELLNELRNYDVVFKLN
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaattttcgataccgaaaccaccggattgcccaaacgatgggacgctcctatt
accgataccgacaattggccgcgttgtattcaaattgcttggcaattacacgatgccatg
gggaactgtattgaaagtcaagattatttagtacaacccgacggatttaatattccttat
gatgccgaaaaaattcacggtatttcaacagaacttgctcaagaagaaggaattccatta
ttagaggttttagagaaatttaaaacagctcttggaaaagccaaatttgtagttggacaa
aatgtaaagttcgatttaaatattatgggtgccgagtttgtgcgcgaaagtataaaaaac
aacttgcaagaattaccagttttagatacttgtaccgagcacacagccgaattatgtcag
attccaggcggtcgttacggaaaatttaaactgccaactttaacagagttacacgaattt
ttatttaaagaacctttcgctgaagcccataatgctactgccgatgtggaagctacaacc
cgttgttttttagagttaattcgtttagaagaatttacacaagagcaactcgatgttgca
cccgattacttcgaaaaattcaaagaagcaaacccttcagaaatacaacttataggttta
aagcacattaatttaaagcaggaaagtgctaaaattcgtgagcagttaaaaaaatcggaa
ggtgttaaaatttcttcagcagaaataaagcaaaacatttcggagttagaggaagttgaa
tttgttcatcttcataaccattcgcaattttcggtattgcaatcgaccatgagtgtggca
gatattgttgaggccgcggcagaacaccacatgccagctgtcgctttaaccgaccatgct
aatatgatgggggcttttcactttgttaatgccgtagacaggcacaacggcagtgttgct
ggtaaaatagctgctgcaaaagagcgtggcgaaaccattccagacaaacccatcaagccc
attattggctgtgagttttttgtttgcgaagatcatacagataaaaccagaaaagataac
ggttaccaaattgtgtttttagctaaaaataaaaatggttaccataatttggcaaaatta
tcgtctgaagcctttgttaatggcttttattatgtaccaagaatcgataaaacccttata
gaaaaatataaagacgatttaattgtacttacaggaaatttatatggtgaagtgccaagt
aaggttttaaatgtaggtgaaaatcaagccgaagaagccttgttgtggtggaaagcacag
tttggcgacgatttgtatgtcgagctgatgcgccataaccaagaagatgaaaatcgtgta
aatccaaccttaatagagcttgccagaaagcacgatgttaagttggtagcatctaataat
acctactacagaaaaaaacaggatgccaatgcgcacgacattttgttgtgtgtaaaagat
ggtgaaaagcaagcaacacctatagggcgcggtcgtggctatcgctatggtatgcctaat
caagattactattttaaatcgggcgaggaaatgaaaaccttgttcaaggatgtgcctgaa
gcaattagtaatattcaagaaataattgataaagttgaagcttataaattagcgcgtgaa
gtattattaccagcgtttgatattccagaggaatttaggcatgaagccgatttagtcgat
ggtggtaagcgtggcgaaaatacttttttaagacacttaacttacgaaggcgccaagaaa
cgctatggcgatcctttatctgatgaagttgttgaacgcttagatttcgaattaagtgtt
attgaaaacacagggtatccgggttatttcttaattgttgaagattttatacgtgaagcc
agaaatatggatgtttctgtgggacctgggcgtggttcggcagcaggttcggtagtagcg
tattgtttatggattactaatatagacccacttaagtacgatttgctttttgagagattc
ttaaatccagatcgtattagtatgcccgatattgatatcgatttcgatgatgaaggtcgg
agtcgggttatggattacgttatcaaaaaatacggtagcaatcaagtagcacaaattatt
acttacggtaccatggcggctaaatcttctattcgtgataccgcacgtgtgctcgatttg
cctctctttgatgccgatagaattgctaaattaattccaaccatgtctaaactaaataaa
atttttggtttaagtgaaaaggaattaagcagtaagtttcgtgccgaagatttagaaaaa
gttaatgaacttttaaacattgccgaagggtctggcttagaagcagaaaccttaaatctg
gcaagaattctggaaggttctgttagaaatacaggtattcatgcctgtggtgttattatt
acgccagacgatattacaaaattcgtacctgtggcaactgccaaggattccgatttgtat
gttacccagttcgacaactcgattgtagaatcggcaggcttgttaaaaatggacttttta
gggttaaaaacattaactcttattaaggatacggttaaaatcgttaaggctagacatggt
attttgttagatccagacaattttcctttagacgatgaagaaacctatgcgttattccag
cgtggcgaaacggttggggtgttccaatacgaatcccctggaatgcaaaaacatcttcgc
gatttaaagcccaccgtttttgaagacttaattgccatgaatgccttgtacagaccgggc
ccgatggaatatattccaagtttcgttagaagaaaacatggtgaagaagaaatcgaatac
gatttgccagccatggaggaatacctaaaagaaacctatggtattacggtgtatcaagag
caggttatgctactgtctcaaagtcttgcaggatttacaaagggtgaagccgatgtattg
cgtaaggctatggggaaaaagcaaattgcggttctagataaaatgaagcctaaatttatc
gaacaggccagcgcaaacggacatgatgccaaagttttagaaaaagtttggaaagactgg
gaggcttttgcgagttatgcttttaacaaatcgcattctacatgttatgcttggattgct
tatcaaaccgcctacttaaaagctcattatccagcagaatatatggcggcagtgctttct
aacaacatgaacgacattaaacaggttacattttttatggaagaatgtaagcgtatgaaa
ttagatgtgttagggccagacgtaaacgaatctttttataaattttctgtaaataaaaac
aatgccgttcgttttggtatgggagctattaaaggggttggtcatggtgctgtgatgact
attgtagagaacagaaaaaaagatggtccttataaatcgattttcgatttagccaaacgt
atcgatttacgtgcagcgaataaaaaagcattcgaaaatttagccctagcaggcggtttc
gatggttttaaagatacacatagagcacagtattttcatgatgatggcgatggtattact
tttttagagaaggctatacgttatggtaacaaacatcaggaaaatgaaaattcggcgcaa
gtaagtttgtttggcgatgcgagtgatgtgcaaattgccgagccacaggtgcctccttgc
gaagactgggggactatggaaaaattatctaaagaaaaagaggtggttggtatttatatt
tcgggtcatccgctggacgattttagaatagaaatgaatacgttttgtaacgccaatatt
tccatgtttgccaatttagagccttatgtaaacagagaattggtttttggaggcgttatt
accgatgtgcaacaccgtgttagtaagcaaggtaaaggctgggccatgtttaccatagaa
gattataatgatagtttcgaatttagaatttttggtgaagagtatttaaaatttaggcac
tttttaatgaataataactttgtttttgtgaaatcgtttattcgagaaggttgggtaaat
aaagacacaggcaaaaaaagtgagccaagattacaatttaatagttttcagttgctgcat
gatgttatggaaaattatgctaaaaagctatctattcaaattgatatcgacgatttaaaa
caggataagattcttaagttaaaagacttaatacaaatgcatcccggaaaccagtcgttg
cattttattgtttacgataataaagatcaaataaaattaaccatgccaagtagaaggcaa
aaagtaaaagtatcgcaagagttgctaaatgaattacgaaattatgatgtagtttttaag
ctaaattaa
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