Siansivirga zeaxanthinifaciens: AW14_05655
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Entry
AW14_05655 CDS
T03699
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sze
Siansivirga zeaxanthinifaciens
Pathway
sze02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sze00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AW14_05655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sze03021
]
AW14_05655
Transcription machinery [BR:
sze03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AW14_05655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Crp
DUF6285
Motif
Other DBs
NCBI-ProteinID:
AJR03212
UniProt:
A0A0C5WA83
LinkDB
All DBs
Position
complement(1232395..1233258)
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AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRESKSLDKYLQDISKISLITAEEEVELAQKIRQGDQQALDKLTTANLR
FVVSVSKQYQNQGLTLPDLINEGNAGLVKAAKRFDETRGFKFISYAVWWIRQAIMQALAE
QSRIVRLPLNKIGSINKINKAYSFLEQTHERAPSAEEIANNLDLTLSDVKQSMKISGRHV
SMDAPFKEGEDSNLYDVVKSNETPQPDNNLMNDSLTTEVNRALNTLSLNEAEVIRNYYGI
SNTQPMSLQEIGDAFGLTRERVRQIKEKGIRKLRHTSKSKVLKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaattaaaaattacgaaacaagttaccaatagagaatctaagtcgttagataag
tatcttcaagatattagtaaaatatcattaattacagccgaagaagaagtagaattagct
caaaaaattcgacaaggcgaccaacaagctctagacaaattaacaactgctaacttacgt
tttgtagtatcggtctcaaaacaatatcaaaatcaaggtttaacccttcccgatttaatt
aacgaaggcaatgctggcttagtgaaagcagcaaaacgttttgatgaaacccgagggttt
aaatttatttcttatgccgtttggtggataagacaagccattatgcaagccttagccgag
caatctagaattgtaaggttaccgttaaacaaaattgggtctattaacaaaattaataaa
gcgtattcctttttagagcaaacacatgaaagagcgccaagtgccgaagaaattgcaaac
aatttagatttaacattaagcgatgttaagcagtctatgaaaatttcaggaagacacgtg
tctatggatgccccttttaaagaaggtgaagattctaacctatacgacgtagtaaaatcg
aacgaaacaccgcaaccagataacaatttaatgaacgattcgctaaccacagaggttaat
cgtgcattaaataccctgtctttaaatgaagctgaagttattcgtaattattatggcata
agcaacacacaacctatgagtcttcaggaaattggcgatgcatttggtttaactcgcgag
cgtgtaagacaaattaaagaaaaaggtattcgcaagctaagacatacatcaaaaagtaaa
gtattaaaaacgtatttaggataa
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