Siansivirga zeaxanthinifaciens: AW14_09830
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Entry
AW14_09830 CDS
T03699
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sze
Siansivirga zeaxanthinifaciens
Pathway
sze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AW14_09830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sze03019
]
AW14_09830
03400 DNA repair and recombination proteins [BR:
sze03400
]
AW14_09830
Enzymes [BR:
sze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AW14_09830
Messenger RNA biogenesis [BR:
sze03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AW14_09830
DNA repair and recombination proteins [BR:
sze03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AW14_09830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Mnd1
Motif
Other DBs
NCBI-ProteinID:
AJR03876
UniProt:
A0A0C5VXN5
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All DBs
Position
complement(2120261..2122165)
Genome browser
AA seq
634 aa
AA seq
DB search
MEHPLNILERYWNYTAFRPEQEAIINSVLEGEDTFVLLPTGGGKSLCFQIPALIKPGICI
VISPLVALMKDQVKQLTDKGIKAMALTSGIDYNQLDTLLDNCIYGNYKFLYLSPERLQQE
LVQDRIKQMPVNLIAVDEAHCISQWGSDFRPAYKNIALLRQIQPSVNVVALTASAKPEVV
NDIVTELDFINPKIFKHSFLRTNLAYMVFHEDDKYYRIETILKKYKASSIIYVRNRKATL
ELSAFLNSRNISATFYHGGLPNMEKDANMKTWIDNQKQVMVATNAFGMGIDKPDVKTVIH
INLPDSIESYFQEAGRAGRNGEKAFAVILKNNSDAQLVKNQFLNVLPTVDFVKQVYRKLC
NYFQISFGEGEYQTFDFDFNTFCKTYNFNQTLTYNALLLLDRNSVITLSKQFKNKVQVQF
IISSNAIFNYLETHPDLTIIVKSILRMYGGVFDNITKVDLFKIAEKASVNEQQVKQALMQ
LEKDGIIVLNLAKTDAQITFIEPREDEKTINRIASIIEQQNKLKQDQVAAMLDYIENESV
CKSSQLLEYFGETNTKPCGICSVCIKTPKKSKPQNTGNLRNQIIELLETGDKSSRQLIEH
LHCTDNELKTVLNLLLEHHIISITPTNTYKLSHL
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggaacatcctttaaatatattagaacggtattggaattacaccgcatttagacccgaa
caagaggccataataaattcggttttagaaggcgaagacacttttgtgcttttacctacg
ggtggtggtaaatcgttatgttttcaaataccagcgcttataaaacccggaatttgcatc
gttatttcgcctttagtggcattaatgaaagatcaggtaaagcaattaaccgataaaggt
ataaaagccatggccttaactagcggtattgattacaaccaattagacacgcttttagac
aattgcatttacggaaattataaatttttatacctatcgccagaacgtttacaacaagaa
ctggttcaagatcgaattaaacaaatgccggttaatttaattgctgtagatgaagcccac
tgtatttcgcaatggggcagcgattttagacccgcttataaaaatattgcccttctcagg
caaatacaacccagtgtaaatgtggtggctttaacagcatcggcaaaaccagaagttgtt
aacgatattgtaacagaactagattttattaatccgaaaatatttaaacattccttttta
agaaccaatttagcatacatggtgtttcatgaagacgataaatactatcgcattgaaacc
attttaaaaaaatacaaagcctcgtctattatttacgttagaaaccgaaaagcgacccta
gaattaagtgcttttttaaactccagaaacattagcgccaccttttaccatggcggattg
cctaatatggaaaaagatgccaacatgaaaacttggattgataaccaaaaacaagttatg
gtagccaccaatgcttttggtatgggtatagataaacccgatgttaaaaccgtaatacat
atcaatcttccagatagtatagaaagttattttcaggaagcgggtcgtgcgggtagaaac
ggcgagaaagcttttgctgttattttgaaaaataatagtgacgcgcagttagttaaaaat
cagtttttaaatgtgctgcctacagtagattttgtgaaacaagtgtaccgaaagctctgt
aattattttcaaatatcatttggtgagggcgaataccaaacgttcgatttcgattttaat
accttctgcaaaacatataattttaatcaaacgttaacctacaatgcgttgttattgtta
gaccgaaatagcgttatcaccttatcgaaacaatttaaaaataaagttcaggttcagttt
ataatttcttccaacgctatatttaattatctagaaacccatcccgatttaaccattatt
gtgaagtcaatattacgcatgtatggaggcgttttcgataatataacgaaggttgatttg
tttaaaattgccgaaaaggcatcggtaaacgagcaacaggtaaaacaagcgttaatgcaa
ttagaaaaagatggcattatcgtattaaatttagcaaaaaccgatgctcaaataacattt
atcgaacctcgtgaagatgaaaaaaccatcaatagaatagctagtattatcgagcaacaa
aacaaattaaaacaagaccaggtagcagccatgctagactatattgaaaatgaatcggtt
tgtaaaagttcgcaactgctagaatattttggagaaacaaacaccaagccctgtggcatt
tgttctgtttgcatcaaaacgcctaaaaaatcaaaaccacaaaacacaggtaatctaaga
aatcaaattattgaattacttgaaaccggcgataaatcgtcgagacagcttattgaacat
ttacattgcaccgataatgagttaaaaaccgttttaaacttgcttttagagcatcatatt
attagtattacaccaacaaatacttataaattaagtcatttataa
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