Siansivirga zeaxanthinifaciens: AW14_11555
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Entry
AW14_11555 CDS
T03699
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sze
Siansivirga zeaxanthinifaciens
Pathway
sze03420
Nucleotide excision repair
sze03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AW14_11555
03430 Mismatch repair
AW14_11555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sze03400
]
AW14_11555
Enzymes [BR:
sze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AW14_11555
DNA repair and recombination proteins [BR:
sze03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AW14_11555
MMR (mismatch excision repair)
Other MMR factors
AW14_11555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJR04186
UniProt:
A0A0C5VYR9
LinkDB
All DBs
Position
2494465..2496828
Genome browser
AA seq
787 aa
AA seq
DB search
MEKYLSQLNEAQLAPTLQKDGPMIVIAGAGSGKTRVLTYRIAYLMHQGVDPFNILSLTFT
NKAAREMKERIATIVGQSEAKNLWMGTFHSVFAKILRTEADRLGYPSNFTIYDSQDSDRL
IGAIIKEMGLDKDIYKAKQIRSRISSYKNSLITVRAYFQNPELIEADTMARRPRLGDIYK
EYVERCFKAGAMDFDDLLLKTNELLTRFPEVLMKYQNRFKYILVDEYQDTNHSQYLIVRA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYDDVKLFRLEQNYRSTKNIVNAANS
IIDKNETKLDKVVWTANNEGGKIIVNRSLTDSDEGRYVASTIWETKMQNQLKNSDFAVLY
RTNAQSRSIEDGLRKRDIPYRIYGGVSFYQRKEIKDVLSYLRLIINPADEEALKRIINFP
PRGIGNTTIDKLVVAANSYKRSIFEVMKNIDKTEIRLNAGTRTKLLDFVTMIESYQVLNE
TADVFELAEYVTRKTGLIQEFKKDTTPEGVTRMENIEELLNGMKDFVEGQKEIADTTGSL
AEFLEDVALATDLDADKGDADHVALMTIHLAKGLEFPHVFIVGLEEDLFPSAMSMGTRSE
LEEERRLFYVALTRAEKQAYLTYALSRYRWGKLVDSEPSRFIGEIDEAYLDIVTPMEERR
FNPMLDADIFGDVMPSRTSTTDPNKIRFKPAKQAVLKKSMGEKKEPVKFQVTTPKNLKPV
SKANDTENTNLFDNKLAVGNIVKHLRFGSGEVLSIEGVGADVKAEIKFQHGGVKKLLLRF
AKLEVIG
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaatatttaagtcaattaaacgaagctcaattagcaccaaccttacaaaaagat
ggcccaatgattgttattgcgggtgcgggttctggtaaaacgcgagttttaacctataga
attgcttacttgatgcatcaaggtgtcgatcccttcaatattttatcattaacatttacc
aacaaagcggcacgcgaaatgaaagagcgtattgcaactattgtgggacaaagtgaagct
aaaaatttgtggatgggtacgttccactcggtttttgccaaaattttacgcaccgaagcc
gatcgtttgggctatccgagtaatttcaccatttacgattctcaagattcagacaggctt
ataggagctattataaaagaaatggggctcgataaagacatttataaagccaaacaaatt
agatccagaatatcttcttataaaaatagtttaattacggtgcgtgcttattttcaaaat
ccggaattaattgaagccgacaccatggcacgaagaccacgattaggagatatttacaaa
gaatatgtagagcgttgctttaaagctggcgctatggattttgatgatttacttttaaaa
accaacgagttactaacccgttttcccgaggttttaatgaaatatcaaaaccgttttaaa
tatattttagtagacgagtaccaagataccaaccactcccaataccttatcgttcgggct
ttgtccgataaatttcaaaatatatgtgtggtaggagacgatgcacaaagtatttatgcc
tttcgtggagcgaacatcaacaatattttaaatttccaaaaagattacgacgatgttaaa
ctttttaggctggaacaaaattatcgttctactaaaaatattgtaaatgctgccaattct
attatcgataaaaacgaaacgaaactcgataaagttgtttggacagccaataatgagggc
ggtaaaattatagtaaaccgttcgttaaccgatagcgacgaaggtcgttatgtagccagt
accatttgggaaaccaaaatgcaaaatcaattaaaaaacagtgattttgcggttttatac
agaaccaatgcgcaatcgcgttctatagaagacggtctgcgcaaacgagatattccttat
agaatttatggcggtgtgtctttctatcaaagaaaagagataaaagatgttttatcgtac
ctgcgattaattataaatcctgccgatgaagaagctttaaaacgaataattaattttcct
ccaagaggcatcggtaatacaaccatcgataaattagttgttgcagccaacagttacaag
cgttcgatttttgaagtaatgaaaaacatcgataaaactgaaatacgattaaatgctggc
acaagaactaaattattagattttgtaaccatgattgaaagttatcaggtgttaaatgaa
actgccgatgttttcgaattagcagaatatgtaaccagaaaaacaggattaattcaggaa
tttaaaaaagatacgacaccggaaggggtaacccgtatggaaaatatcgaggaactttta
aatggtatgaaagattttgttgaaggtcagaaagaaatcgccgataccactggttctttg
gccgagttccttgaagatgtggctctggcaaccgatttagatgccgataaaggtgatgcc
gatcatgtggcgctaatgaccattcacttggctaaaggattggagtttcctcatgtgttt
attgttggtctggaagaagatttattcccaagcgccatgagtatgggaacacgaagtgaa
ttagaagaagagcgtcgattattttacgtggcgcttactcgtgccgaaaaacaagcctat
ttaacttatgctttgtcgcggtatcgttggggtaaattagtcgattcggaacccagtcgt
tttattggggaaatagacgaagcatatttagatattgtaacacctatggaagaacgtcgt
tttaacccgatgctagatgccgatatttttggcgatgttatgcctagccgcacatctaca
accgatcctaataaaattcgttttaaacctgctaaacaagccgttttaaagaaatcgatg
ggagagaaaaaagaacctgtgaaatttcaggttacaacgcctaaaaatttaaaacccgtt
tctaaagctaacgataccgaaaacacgaatttatttgataataaactggccgttggaaac
attgtaaaacatttacgttttggttcgggtgaagtattaagtatcgaaggtgttggtgcc
gatgtaaaagccgaaattaagtttcagcatggcggtgttaaaaaattacttttgcgcttt
gcgaagttggaagttattggctaa
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