Streptococcus zhangguiae: J5M87_03860
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Entry
J5M87_03860 CDS
T10621
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
szg Streptococcus zhangguiae
Pathway
szg03420
Nucleotide excision repair
szg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
szg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J5M87_03860 (pcrA)
03430 Mismatch repair
J5M87_03860 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
szg03400
]
J5M87_03860 (pcrA)
Enzymes [BR:
szg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J5M87_03860 (pcrA)
DNA repair and recombination proteins [BR:
szg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J5M87_03860 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
J5M87_03860 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QTH48468
LinkDB
All DBs
Position
782893..785163
Genome browser
AA seq
756 aa
AA seq
DB search
MNPLLNGMNDRQSEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKLVNPWNILAITF
TNKAAREMKERAFALNPATQDCLIATFHSMCVRILRRDADHIGYNRNFTIVDPGEQRTLM
KRILKNLNLDPKKWSERSILGTISNAKNDLIDEVAYESQAGDLYTQIVAKCYTAYQKELR
MSEAVDFDDLIMLTLRLFDQHPDVLTYYQQKFQYIHVDEYQDTNHAQYQLVKLLASRFKN
ICVVGDADQSIYGWRGADMQNILDFEKDYPESKVVLLEENYRSTKTVLQAANDVIQNNRN
RRPKNLWTQNDEGEQITYYRARDEQDEALYVATQIDEVVRAGRKYRDVAVLYRTNAQSRT
IEEALLKATIPYTMVGGTKFYSRKEIRDVIAYLNVIANPADNLSFERIVNEPKRGVGPGT
VDKLRDFAQMQELSLLEASQQIMLSGIRGKAAQAIFDLSHLLYQLRDQLDELSITDLVEA
VLQKTGYMEALTVQATLEANARIENLQEFLSVTKHFDEESEMEGESGLDTLSRFLNDLAL
IADTDDGDRESSEVTLMTLHAAKGLEFPVVFLIGMEENVFPLSRAAEDEDELEEERRLAY
VGITRAEKQLYLTNANSRLLFGRSSYNQPSRFIREISSNLLDYQGLARPANTAFKASYVN
GQMSKFGQGMSLQQAIQSRKSQIQPRSLGEELPFGKSSSSAQTDWAVGDIAVHRKWGRGT
VLEVTGSGASQELKINFPDLGLKKVLASLAPIEKAD
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgttactaaatggaatgaatgatagacaatcggaggcagttcaaacgacagaa
ggacctttgttgattatggcaggagcaggttctggtaagacacgggtcttgacgcaccgg
attgcctatttgattgatgaaaaattagtcaatccttggaatattttggcgattaccttt
accaataaggcagctcgggagatgaaagagagggcttttgcgctcaatcctgcaacgcaa
gattgcttgattgcgaccttccactccatgtgtgtacggattttacgccgagatgctgat
cacattggctacaatcgcaactttaccattgtcgacccgggtgagcagcggaccttgatg
aagcggattttgaaaaatcttaatttagatccgaaaaaatggagtgaacgctccattcta
ggtacaatttcgaatgccaaaaatgatttgattgatgaagtagcctatgaaagtcaggca
ggtgatctgtatacgcagatagttgctaaatgttacacggcctatcagaaagaattgcgt
atgagtgaggcagttgattttgatgatttaatcatgctgaccctgcgtttatttgatcaa
catccagatgtactaacctattatcagcaaaaattccagtatatccatgtcgatgagtat
caagataccaaccatgcccaataccaattggtcaagctccttgcttctcgttttaaaaat
atctgtgttgtaggagatgcagaccagtctatctatggctggcgtggggcggatatgcag
aatatccttgattttgaaaaagattatccagagagtaaggtcgttttattagaagaaaat
tatcgctcgactaagacagtcttgcaagcggctaatgatgtgatccaaaacaatcgcaac
cgtcgtccgaaaaatctctggacacaaaatgacgaaggcgagcagattacctactaccga
gcacgagatgagcaggatgaggcgctttatgttgctactcagatagatgaagtggtacga
gctggtcgaaaatatcgggatgttgcagtcttgtaccgtaccaatgcccaatctcgtacc
attgaagaagctcttttaaaagctactattccctataccatggtcggtggaaccaagttc
tacagccgtaaggaaattcgtgatgtcattgcctacttgaatgtcattgcaaatcctgcg
gataatctgtcgtttgagcggattgtcaatgagccaaaacgtggagtgggacctggtacg
gtggataaacttcgtgattttgcccaaatgcaggagctatcgttactggaagcaagccaa
cagattatgctgtctggtattaggggcaaggctgcgcaagctatctttgacttatcccac
ttactctatcagttgcgagaccagttagatgagctgtcgattacggatctggtagaagct
gttttgcaaaagacgggctatatggaagccctcactgtgcaagcaacattagaagctaat
gctcgaatagagaacttgcaggaatttctttctgtgaccaagcattttgatgaggaatcg
gagatggaaggtgagtcaggtctggataccttgagccgcttcctcaatgatctagccctg
attgcagatacggatgacggagaccgagagagttcagaagtgaccttgatgaccctacat
gcggcaaagggcttggaatttccggtagtatttttgattggaatggaagaaaatgtcttc
ccgctcagtcgggctgctgaagatgaggatgaattagaagaagaacgccgtttggcctat
gtgggaattacgcgggcagaaaagcagctttatttaacaaatgcaaattcacgcctgctc
tttggtcgcagtagctacaaccagcctagtcgctttattagagaaatatcgagtaatttg
ttggattaccaaggcttagcaagacctgccaatactgcttttaaggcgtcctacgtcaat
ggtcagatgagcaaatttggtcaaggtatgagtttacagcaggccattcaatcgcgcaag
tctcagattcagccacgcagtttgggagaagagttgccttttggaaaatccagctcctct
gcgcaaacagactgggcagtaggcgacattgcggttcaccgcaaatggggacgaggaacg
gttcttgaagtgactggtagcggagcgagtcaagaattgaaaatcaatttcccagacttg
gggctgaaaaaagtcttagccagtctcgcaccaattgagaaagcagactaa
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