Streptococcus zhangguiae: J5M87_04990
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Entry
J5M87_04990 CDS
T10621
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
szg Streptococcus zhangguiae
Brite
KEGG Orthology (KO) [BR:
szg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
szg03032
]
J5M87_04990 (topA)
03400 DNA repair and recombination proteins [BR:
szg03400
]
J5M87_04990 (topA)
Enzymes [BR:
szg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J5M87_04990 (topA)
DNA replication proteins [BR:
szg03032
]
Prokaryotic type
DNA Topoisomerases
J5M87_04990 (topA)
DNA repair and recombination proteins [BR:
szg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J5M87_04990 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
NtdA_N
Toprim_4
DUF2996
DUF5091
C1_2
Motif
Other DBs
NCBI-ProteinID:
QTH48679
LinkDB
All DBs
Position
complement(1037088..1039172)
Genome browser
AA seq
694 aa
AA seq
DB search
MVTTKKKATTKKNLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDLKKSSMSIDFENNYE
PEYINIRGKGPLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHILGLDEQDKNRVVFN
EITKDAVKNAFKEPRTINHDLVDAQQARRVLDRIVGYSISPILWKKVKKGLSAGRVQSVA
LKLIIDRENEIRNFKPEEYWTIDATFKKGTKKFQASFYGVDDKKLKLETNEQVKEVLARI
KGEDFLVEKVDRKERKRNAPLPYTTSTMQMDAANKINFRTRKTMMVAQQLYEGVSLGTGG
TQGLITYMRTDSTRISPVAQAQAADFITERFGTKYSKHGSKVKNASGAQDAHEAIRPSNV
QLTPESIAKYLDKDQLRLYTLIWNRFVASQMTAAIFDTMSVRLAQNGVLFAANGSQVKFD
GYMAVYNDSDKSKMLPDMTVGDTVQRVLTKPEQHFTQPPARYSEATLIKTLEENGVGRPS
TYAPTIDTIQKRYYVKLAAKRFEPTELGEIVNRLIVEFFPDIVNVTFTAEMEQKLDDVEI
GKEQWQKIIDSFYQPFKVELAKAETEIEKIQIKDEPAGFDCDVCGHEMVIKLGRFGKFYA
CSNFPDCRNTKQITKEIGVICPVCDKGQVIERKSKRNRVFYGCDRYPECEFTSWDKPIGR
DCPKCQHYLVEKKVRGGGKQVICPNGDYEEKKIK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaacaaagaagaaagcaacgactaagaaaaatctcgtcatcgtggaatcgcct
gcaaaggctaaaacgattgaaaaatatctcggacgaaattataaggtagttgcctcagtc
ggacatattcgcgatttaaaaaaatcaagtatgtcgattgattttgaaaataattatgaa
ccagagtatatcaatatccgtggaaaaggtccgctaatcaatgacctaaaaaaagaagct
aaaaaggccaaacaagtttttctcgcaagtgacccggatcgtgaaggagaagcaatttct
tggcatttggctcatattttaggtttagacgagcaggacaaaaatcgtgtcgtattcaac
gaaattacaaaagatgcagtcaaaaatgcttttaaagagccacgaacgattaatcatgat
ttggtggatgcccagcaagcacgtcgtgttctagatcgtatcgtggggtattctatttct
cctattctatggaagaaggttaagaagggcctatctgcggggcgtgtacaatccgtagcc
ctaaaactaattattgaccgtgaaaatgagattagaaatttcaaaccggaagaatattgg
acaattgatgcaacctttaaaaaaggaactaaaaaatttcaagccagtttctatggtgta
gatgataagaaactgaaactcgaaacaaatgaacaggtaaaagaagtcttggcacgtatt
aagggagaagatttcttagttgaaaaagttgatcgaaaagaacgcaaacgcaacgcacca
ttgccatataccacttcaacaatgcaaatggatgcagctaacaaaatcaattttcggaca
cggaagaccatgatggttgcgcagcaattatatgaaggagttagccttggaaccggtgga
acgcaaggtttaattacctatatgcgtaccgattcaactcgaatcagtccagtcgctcag
gcacaggcagcagattttattacagaacgttttggtaccaagtattctaagcacggtagc
aaagtcaaaaatgcgtctggtgcccaggatgcacatgaggctattcgtccttctaatgtt
caattaactccggaatcaattgccaaatatttggataaggatcagttgcgactctatacc
cttatctggaatcgctttgtagcaagtcaaatgacagcagctatctttgataccatgagt
gtacggctcgcccaaaatggtgtgttattcgccgcaaatggtagtcaagtaaaatttgac
ggatatatggctgtttacaatgactcagataagagcaaaatgttgccagatatgacagtt
ggcgacacagttcaacgtgtcttgaccaagccagaacagcattttactcagcctcctgct
cgttattcggaagcgaccttgattaaaacgttagaagaaaatggagtgggtcgtccctca
acctatgctccaactatcgatacgattcagaaacgttattatgtcaaattagcggccaag
cgatttgaaccaacagaattgggtgaaattgtcaatcgtttgattgtcgaatttttccca
gatattgtcaatgttacctttacagctgagatggaacaaaagctagatgacgttgaaatt
ggtaaagaacagtggcagaagattattgatagtttctaccagccgtttaaggttgaacta
gccaaggctgaaacggaaattgaaaaaattcaaatcaaggatgagccggctggctttgat
tgtgatgtttgtggtcacgaaatggtgattaaattagggcgttttggcaaattctatgct
tgtagtaattttcctgattgccgtaataccaaacaaattacaaaagaaattggcgtaatc
tgcccagtatgcgacaaaggtcaggtcattgaacgtaaaagcaagcgcaatcgtgttttt
tatggctgtgatcgctatccagaatgcgaatttacttcctgggataagccgattgggcgc
gattgtccaaaatgccaacattatcttgttgagaagaaggtacgcggtggcggcaagcaa
gtaatctgtccaaatggtgattacgaagaaaagaagattaaataa
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