Streptococcus zhangguiae: J5M87_06580
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Entry
J5M87_06580 CDS
T10621
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
szg Streptococcus zhangguiae
Pathway
szg00521
Streptomycin biosynthesis
szg00523
Polyketide sugar unit biosynthesis
szg00525
Acarbose and validamycin biosynthesis
szg00541
Biosynthesis of various nucleotide sugars
szg01100
Metabolic pathways
szg01110
Biosynthesis of secondary metabolites
szg01250
Biosynthesis of nucleotide sugars
Module
szg_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
szg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
J5M87_06580 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
J5M87_06580 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
J5M87_06580 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
J5M87_06580 (rfbB)
00525 Acarbose and validamycin biosynthesis
J5M87_06580 (rfbB)
Enzymes [BR:
szg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
J5M87_06580 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
NmrA
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
QTH47221
LinkDB
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Position
complement(1380018..1381064)
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AA seq
348 aa
AA seq
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MSEFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLVEILGERVELVV
GDIADSELVDQLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRF
HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSFG
VKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHSSGVWTI
LTKGEIGETYLIGADGEKNNKEVLELILEKMGQPADAYDHVTDRAGHDLRYAIDASKLRD
ELGWKPEFTNFEAGLEETIKWYTDHADWWQAEKEAVEANYAKTQKVIK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatttaaaaatattatcgtcacaggtggagctggttttatcggctcaaacttt
gtacattatgtctataataatcatccggatgtccatgtgacagtcttggataagttaacc
tatgctggaaaccgtgccaatctagttgagattctaggtgagcgtgttgagcttgtggtt
ggcgatattgctgacagtgagttggttgatcagttagcagcaaaagcagatgcgattgtt
cactatgccgcagaaagccacaatgacaattcactgaatgacccaagtcccttcattcat
acgaactttatcggaacctatactctgttagaagcagcacgtaaatacgatattcgcttc
caccatgtatcaacagatgaggtttatggggaccttccgcttcgcgaagatttaccaggt
catggtgagggcccaggtgagaaattcacggctgaaaccaaatacaatccaagttcaccg
tattcatcaaccaaggcagcttctgacttgattgtgaaggcttgggtacgttcatttggt
gtcaaagcaacaatttccaactgttcaaacaactacggaccttaccaacacattgagaaa
tttattccacgtcaaattactaatattttgagcggtatcaagccaaaattatatggtgaa
ggaaaaaatgttcgtgactggattcatactaatgaccattcctctggtgtgtggacgatt
ttgactaagggtgaaattggtgaaacctacctaatcggtgctgatggtgagaagaataac
aaggaagtcttggagttgattttagagaaaatgggtcaacctgctgatgcctatgaccac
gtaacagaccgtgctggtcacgacctacgttatgcgatcgatgcaagcaaactccgcgat
gagcttggttggaaaccagaatttaccaactttgaagcaggtctggaagaaacgatcaaa
tggtatacagaccatgcagattggtggcaggctgaaaaagaagccgttgaagctaactat
gcgaaaacacagaaggtcattaaataa
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