Streptococcus zhangguiae: J5M87_08960
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Entry
J5M87_08960 CDS
T10621
Name
(GenBank) 3'-5' exoribonuclease YhaM family protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
szg Streptococcus zhangguiae
Brite
KEGG Orthology (KO) [BR:
szg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
szg03019
]
J5M87_08960
Messenger RNA biogenesis [BR:
szg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J5M87_08960
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QTH47652
LinkDB
All DBs
Position
complement(1921503..1922444)
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AA seq
313 aa
AA seq
DB search
MKINQMKKDELFEGFYLIKTADVRQTRAGKDYLALTFQDDTGEIEGKIWDAQPGKIKDFT
AGTVVHMQGRREVYNNTPQVNQIILRLPKPGEPADPADFKEKPPVNVEDTRKYLSQMMFQ
IENAVWQRIVRALYSKYDQEFYSYPAAKTNHHAFYSGLSFHTATMVRLADKIGDIYPQLN
KSLLFAGIMLHDLAKVIELSGPDNTNYTVRGNLIGHISLIDEEITKVLIELGIDDTKEEV
TVLRHVILSHHGLLEYGSPVRPQIMEAEILHMIDNIDAEMMMMLTALDKVGPGEMTSRIF
AMDNRAFYKPDID
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaccaaatgaaaaaagatgagctctttgaaggcttttatctgattaagaca
gctgatgttcggcagacaagggctggaaaagattatcttgccttgactttccaagatgat
actggagagattgaaggaaaaatatgggatgcccaaccaggaaagattaaagattttacg
gcaggtactgtcgtccacatgcaggggcggcgtgaagtatacaacaatacacctcaagtt
aatcaaattatcttaaggttaccaaaaccgggtgagccggctgatccagcggatttcaag
gaaaagccccctgtcaatgtagaagatacgcgcaagtatttaagtcagatgatgtttcag
attgaaaatgctgtctggcaacgtattgtacgtgccttatatagcaagtatgaccaggag
ttttattcttatccagctgctaaaacgaaccatcatgccttttactcaggcctatctttt
cacacagcgaccatggttcgtttggcagataagattggagacatttatccccagctcaat
aagagtttgttgttcgcaggaattatgctacacgatttagccaaggtcattgaattatct
ggtcctgacaataccaactatactgtacgaggcaatctcatcggccacatttccctgatt
gatgaggagattaccaaggtattgattgagttaggaatcgatgataccaaggaagaagtg
acagttttacgccatgttattcttagtcatcatggcttactcgaatatggtagtcctgtt
cgtccgcagatcatggaagcagaaattcttcacatgattgacaatattgatgcggagatg
atgatgatgttaacagccttggataaggtaggaccaggggaaatgaccagtcgaatcttt
gcaatggataaccgggctttctataagccagatatcgactaa
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