Shewanella zhangzhouensis: K0H63_01215
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Entry
K0H63_01215 CDS
T09194
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
szh
Shewanella zhangzhouensis
Pathway
szh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K0H63_01215 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
szh03021
]
K0H63_01215 (rpoA)
03400 DNA repair and recombination proteins [BR:
szh03400
]
K0H63_01215 (rpoA)
Enzymes [BR:
szh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K0H63_01215 (rpoA)
Transcription machinery [BR:
szh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K0H63_01215 (rpoA)
DNA repair and recombination proteins [BR:
szh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K0H63_01215 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QYK05510
LinkDB
All DBs
Position
255333..256322
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSPTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEILLNLKGLAVILEGKDEAMLTLSKSGAGPVTAADITHDGD
VTIANPDHVICHLTGNHDISMRIRVERGRGYVPASARAQNEDDDRPIGRLLVDASFSPVA
RIAYNVEAARVEQRTDLDKLVIDMTTNGTIDPEEAIRRSATILAEQLDAFVELRDVSVPE
QKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLADDL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttcttaaaccgcgtctcgtggacatcgagcaggttagc
ccaactcgtgccaaagttaccctggaaccgcttgagcgtggtttcggtcatactttaggt
aacgcgttgcgtcgcatccttctgtcgtccatgcctggctgcgcggtcaccgaagttgaa
atcgacggtgtactgcacgaatacagcagcaaggaaggcgttcaggaagacatcctcgag
atcttgttgaacctgaaaggtttggcagtgattcttgagggcaaagacgaggctatgctc
actctgagcaagtccggcgcaggccctgttactgcagcagacatcacccatgatggtgat
gttactatcgccaaccctgatcatgttatctgtcatctgaccggtaatcatgacatcagc
atgcgtatccgcgttgagcgtggtcgtggttatgtgccggcttctgcccgtgcacagaac
gaagacgacgatcgcccaatcggccgtctgctggttgacgcttctttctcaccggttgcc
cgtattgcctacaatgtagaagcggcccgtgttgagcagcgtactgacctggataagctg
gtaatcgatatgaccactaacggtactatcgatcctgaagaggctatccgtcgctctgca
actattctggctgaacagctggatgcgtttgtggaactgcgtgatgtgtctgttccagag
cagaaggaagagaagccagagttcgatccaatcctgctgcgtcctgtcgacgatttagag
cttactgtacgttcggccaactgcttgaaggccgaagcgattcattacatcggtgatctg
gttcaacgcacagaagttgagctgctcaagactcctaacctgggtaagaaatctcttacc
gagatcaaggacgtgttggcttctcgcggtctgtcgttgggtatgcgtctggaaaactgg
cctccagccagcttggcagacgacctgtaa
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