Shewanella zhangzhouensis: K0H63_01745
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Entry
K0H63_01745 CDS
T09194
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
szh
Shewanella zhangzhouensis
Pathway
szh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K0H63_01745 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
szh03019
]
K0H63_01745 (recQ)
03400 DNA repair and recombination proteins [BR:
szh03400
]
K0H63_01745 (recQ)
Enzymes [BR:
szh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K0H63_01745 (recQ)
Messenger RNA biogenesis [BR:
szh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K0H63_01745 (recQ)
DNA repair and recombination proteins [BR:
szh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K0H63_01745 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
HEM4
Motif
Other DBs
NCBI-ProteinID:
QYK05602
LinkDB
All DBs
Position
389285..391108
Genome browser
AA seq
607 aa
AA seq
DB search
MEQPASEHTQDPLSHCLQQVFGYRDFRPGQREVMTRVCQGEDCLVIMPTGGGKSLCYQVP
ALVLPGVTLVVSPLISLMKDQVDSLIQSGVAAAYLNSSQPREQAIEVLRQLRFGELKLLY
VSPERLLQGDFLSRLDELHISMFAVDEAHCISEWGHDFRPEYAALGQLKQRFPHVPVMAL
TATADEATRGSICERLGIQPFQHLASFDRPNIRYTVAEKLNAANQLRQFIQSQKGANGIV
YCSSRRRVDEVAERLRQQGFYAEGYHAGMTQDERASVQDRFLKDQIDVVVATVAFGMGIN
KSNVRFVVHYDIPKSIESYYQETGRAGRDGLDAEALLLFDPADIGRVRHLIEQQEPGPQQ
QVEFHKLYSMAAFAEAQTCRRQVLLHYFGEAANEPCGNCDICIDPPKRYNGTEDAQKVLS
CIYRLNQRFGVNHLIEVLRGSKAASVVDRGHDKLSTWGIGKEKSTEYWLSVTRQLIHLGL
ASQDITRGSSVRLNSAARPVLKGEVALMLAEPRLTLSDVPRKRTSSRTPQNYDRKLFARL
KNLRRTIAEEQDVPPYLVFNDATLAEMAWMLPKSEAEMLAVNGVGERKLARFGGEFLDEI
AAYISGD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaccagcatcagaacacacccaggatcccctgagccattgcctgcaacaggta
tttggttatcgggatttcaggcccggccagcgggaggtgatgacgcgggtgtgtcagggt
gaagattgcctggtgatcatgcccaccggtggcggtaaaagcctttgttatcaggtccct
gcattggtgttgcccggtgtcacactggtggtatcgccgctcatttcactcatgaaagat
caggtcgacagccttattcagtccggtgttgctgctgcgtatctcaattcctcccagccc
cgggagcaggctatagaggtgctgcgccaactcaggttcggtgaacttaagctgctgtat
gtgtcgcccgagcgtttgttgcagggggattttttaagccggcttgatgagctgcatatc
agcatgtttgcggtggatgaagcccactgcatcagcgaatggggccacgatttcaggcca
gaatatgcggcactgggccagctgaaacagcgcttcccccatgtgcctgtgatggcgctc
accgccaccgcagatgaagcaacccgcggcagtatctgcgaacgtcttggcatacagcca
ttccagcatcttgccagtttcgacaggcccaatattcgttacacagtggccgaaaagctc
aatgcagccaaccaattgcggcaatttattcagtcgcaaaagggtgccaacggtattgtg
tattgcagcagtcgtcgccgggtggacgaggtcgccgagcggctcagacaacagggattt
tatgctgagggttatcatgcgggcatgactcaggatgaacgggcgagcgtacaggacagg
tttctgaaagaccaaatcgatgtggtggtggccacagttgcctttggtatgggcatcaac
aagtccaacgtgcgctttgtggtgcattacgatattcccaagagcattgagtcatactat
caggaaaccggcagagccggtcgggatggcctggatgccgaggctttgctgttgtttgac
cccgccgatataggccgggtgcggcatctgattgaacagcaggagccagggcctcagcaa
caggtggagtttcataaactgtattccatggcggcctttgccgaggcgcaaacctgccgc
cgtcaggtattgctgcactactttggtgaagcagccaacgaaccctgcggtaactgcgac
atctgcatcgacccacccaaacgctataacggcaccgaagatgcgcaaaaggtgctttcg
tgtatttatcggctaaatcaacgttttggggtgaatcatctcattgaagtcttgcggggt
tccaaagccgcttccgtggtagacagggggcacgacaagctttcgacctggggtattggt
aaagagaagagcaccgagtattggctcagtgtcacccgtcagcttattcacctcggactc
gccagccaggatattacccgtggctcgtcggtgcgcctgaacagcgctgccagaccggtg
ctgaaaggtgaggtggcgctgatgcttgccgagcctcgtcttaccctcagtgatgtgccg
cgtaagcgcacatcgagtcgaacgccgcaaaattacgatcgtaagttgtttgccagattg
aagaatttgaggcgcaccatagccgaagagcaggatgtgccgccctatctggtgttcaac
gacgctaccctcgccgaaatggcgtggatgctgcccaaatccgaggctgagatgttggcc
gtcaacggcgtgggtgagcgcaaactggcacggtttggcggtgagttcctcgacgagata
gccgcttacatcagtggggattag
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