Shewanella zhangzhouensis: K0H63_02245
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Entry
K0H63_02245 CDS
T09194
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
szh
Shewanella zhangzhouensis
Pathway
szh03420
Nucleotide excision repair
szh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K0H63_02245 (uvrD)
03430 Mismatch repair
K0H63_02245 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
szh03400
]
K0H63_02245 (uvrD)
Enzymes [BR:
szh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K0H63_02245 (uvrD)
DNA repair and recombination proteins [BR:
szh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K0H63_02245 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
K0H63_02245 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_22
DEAD
DUF4391
ResIII
Motif
Other DBs
NCBI-ProteinID:
QYK05687
LinkDB
All DBs
Position
509009..511174
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSFLLDGLNDKQREAVAAPQSSMLVLAGAGSGKTRVLTHRIAWLLQVENQSPYSILAV
TFTNKAAAEMRERVEKIVGHNTGRMWIGTFHGLAHRLLRTHWQDAGLPQSFQIMDSDDQQ
RLLKRILKSMNLDEKQYPPRLVAGYINGKKDQGLRPGHIDAGPFPMEQKLLELYRIYQDS
CDRAGLVDFAEILLRAHELWLNKPHLLAHYQDRFRHILVDEFQDTNAIQYAWIRVLAGNT
ANVMIVGDDDQSIYGWRGAQIENLHRFLQDFPGANTIRLEQNYRSTGNILKASNELIANN
PDRMGKELWTEDKDGEPISLYCAFNEMDEARFIVGRISDWQDKGGMLGECAILYRSNAQS
RVLEEALLHKGMPYRIYGGLRFFERQEIKDAMGYLRLISNRDDDAAFERVVNTPARGIGE
RTLDILRSTARKEQLTLWQTSLRLLEEKVLSGRAANAVKGFLDLIVQLRSDTDELPLYRV
ADHVIQHSGLKAMYEAEKGENAQARVENLEELVTAARSFEMPEELEDMGELNAFLSHAAL
EAGEGQADAHTDAVQLMTLHSAKGLEFPMVFMAGVEEGIFPSKLALEEGDRLEEERRLCY
VGMTRAMQKLYITYAESRRIYGREDYARPSRFIREIPPEYVEEIRLKAQVSAPLVANRFA
HAQQTFNDSGLKIGGRVRHFKFGEGTVTNYEGSGPQARVQVHFDDFGSKWLVVSYAKLES
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttttttgctggatggcctgaacgataagcagcgcgaagccgtggctgca
ccccagtccagcatgctggtgttggccggtgccggcagtggcaagacccgggtgttaact
caccgtatcgcctggctgctacaggtggaaaaccagagtccctattcgatactggcggta
accttcaccaacaaggctgcggccgaaatgcgtgagcgggtcgagaaaatcgttggccac
aataccggccgtatgtggataggtaccttccacggtctggcccatcgtctgctgcgtacc
cactggcaggatgcaggcctgccacaaagcttccagatcatggactcagacgatcagcag
cgtctgctgaaacgcattctcaagagcatgaatctggacgaaaaacagtatccaccgcgc
ctggttgccgggtatatcaacggtaaaaaagaccagggactgcgcccaggccatatagac
gcaggtccattccccatggagcaaaagctgctggaactgtaccgtatctatcaggacagc
tgtgaccgggcaggcttggtggactttgccgaaattctgttgcgcgcccatgagctttgg
ctcaataaaccccatctgctggcccactaccaggacaggttccgccatattctggtggac
gagtttcaggacaccaacgccattcagtacgcctggatccgggtgctggcaggcaacacg
gcaaatgtgatgatagtgggggacgatgatcagtcgatttacggctggcgcggcgctcag
atagaaaacctgcatcgctttttgcaggacttccccggcgccaacaccatacgcctggag
cagaattaccgctccaccggcaatattctcaaggcttccaacgaacttatcgccaacaac
cccgaccgtatgggtaaggagttgtggaccgaagacaaggatggcgagccaatttccctc
tactgcgcctttaacgagatggacgaggcccgctttattgtcggccgcatcagcgactgg
caggacaagggcggcatgctcggtgagtgcgccattctgtaccgttccaacgcccagtcg
cgggtgctggaagaagccttactccacaagggcatgccctatcgtatctatggcggcttg
cgcttcttcgagcgtcaggaaatcaaggatgccatgggctatctgcgccttatctccaac
cgcgacgacgatgccgccttcgaacgtgtggtcaatacgccggcccgtggtataggtgag
cgtacgctggatattttgcgcagcactgcccgcaaagagcaactgaccctatggcagacc
tcgctgcgtctgctcgaggaaaaggtgctgtcgggccgcgctgccaatgcggtgaaagga
tttttggatttgatagtgcagcttcgaagtgacaccgacgagttgccgctgtaccgcgtg
gccgatcatgtgattcagcactcagggcttaaggccatgtacgaggccgaaaagggtgaa
aacgcccaggcccgggtggaaaacctggaagaactggtcacggcagcccgcagctttgag
atgccggaagagctggaagacatgggggagctcaatgcctttttgtcccatgcggcactg
gaggcgggggaaggtcaggccgatgcccacacagatgctgtgcaactgatgacactgcac
tccgccaagggactggaattccccatggtgttcatggccggggtggaagaaggcatattc
cccagtaagctggcgctggaggagggcgaccgcctcgaagaggagcgtcgcctttgctat
gtgggcatgacccgggcaatgcaaaagctttacatcacctatgccgagtcacgacgtatc
tatggccgtgaagactatgccagaccctcgcgctttatccgcgaaatcccccccgagtat
gtggaagaaattcgcctcaaggcgcaggtatcggcgccactggtggccaaccgttttgcc
catgcccagcaaacctttaatgattcaggcttaaagattggcggccgggtacggcatttt
aagtttggtgaaggcactgtcaccaactacgagggcagtggcccacaggcgagggtacag
gtgcattttgatgatttcggcagcaagtggctggtggtcagctacgccaagctggaatcc
ctgtga
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