Shewanella zhangzhouensis: K0H63_02595
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Entry
K0H63_02595 CDS
T09194
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
szh
Shewanella zhangzhouensis
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
szh03009
]
K0H63_02595 (rimO)
Enzymes [BR:
szh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
K0H63_02595 (rimO)
Ribosome biogenesis [BR:
szh03009
]
Prokaryotic type
ribosomal protein modification factors
K0H63_02595 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
NTPase_1
YajR_YAM
Methyltransf_2
UPF0180
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QYK05751
LinkDB
All DBs
Position
complement(590616..592040)
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AA seq
474 aa
AA seq
DB search
MNKTVETFDPKQTTTLETPAKTLAAEAKASDGTIQGNRIGFVSLGCPKNLVDSERILTQL
RIDGYEVTNSYDNADLVIVNTCGFIDAAVEESLDAVREALEENGKVIVTGCLGAKENQIR
EVHPDVLEITGPHSYEAVLNHVHKYVPKPEHNPFISLIPQTGVKLTPKHYAYLKISEGCD
NRCTFCIIPALRGDLDSRGVGSVLDEAKRLVESGVQEILVVSQDTSAYGKDKDGRTDFWN
GMPVKQDITSLARQLGKMGAWVRLHYVYPYPWVDDLIPLMAEGLILPYLDLPLQHASPRV
LKMMKRPGRVDRQLDAIKKWREICPDLVIRSTFIVGFPGETEEDFEMLLDFLREARLDRV
GCFKYSEVDGAVANTLAELISEEVKEDRYERFMEVQAEISAERLARLVGRELDILIDDVD
EEGAIGRSYADAPEIDGMVFINGETELTPGDMVRARIVASDEHDLWAELVALED
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaagacagtcgaaacttttgatcccaagcagactaccacgctcgagaccccagcc
aagaccctggcagcagaagccaaggccagcgacggcaccattcagggcaaccgtatcggc
tttgtcagcctgggctgccccaagaatctggtggactcagagcgcattctgacccagctg
cgtatcgacggttacgaggtaaccaacagctacgacaatgccgatctggtgattgtaaac
acctgtggctttatcgatgccgctgtggaagagtcgctggacgccgtgcgtgaagccctt
gaagaaaacggcaaggtgattgtgaccggctgtttgggtgccaaagaaaaccaaattcgc
gaagtgcaccccgatgtgctggaaatcaccggcccccacagctacgaggctgtgctgaac
cacgtacacaagtatgtgccaaagcctgagcacaaccctttcatctcgctgatcccccag
acaggtgtaaagctgacgcccaagcactatgcctacctgaagatttctgaaggctgtgac
aaccgctgcaccttctgcatcatcccagccctgcgtggcgacctggacagccgcggcgtc
ggcagtgtgctggacgaagccaaacgtttggttgaaagcggcgtacaggaaattctggta
gtgagccaggacacctccgcctacggcaaagacaaagatggccgcaccgacttctggaac
ggcatgccggtaaaacaggacatcaccagcctggcacgccagctgggcaagatgggcgcc
tgggtgcgtctgcactacgtgtacccatacccctgggttgacgacttgatcccgctgatg
gccgaaggtctcattctgccttacctggacctgccgctgcagcacgccagcccgcgcgtt
ctcaagatgatgaagcgtccaggccgggttgaccgccagttggatgccatcaagaaatgg
cgtgagatctgccctgacctggtgatccgctctacctttatcgtgggcttccccggcgaa
accgaagaagacttcgaaatgctgctggacttcctgcgtgaagcacgcctcgatcgcgtt
ggctgtttcaagtattccgaggtggatggcgccgtggccaataccctggccgagcttatc
agcgaagaagtgaaagaagacaggtacgagcgctttatggaagtacaggccgaaatcagc
gccgagcgtctggcccgtctggttggccgtgagctggatattctgattgatgatgttgac
gaagaaggtgccatcggccgctcttacgccgatgcccctgaaatcgatggcatggtgttt
atcaatggcgaaactgagctgactcccggtgatatggtgcgtgcccgtatcgttgcctcg
gacgagcatgatctctgggccgaattggtcgccctggaagactga
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