Shewanella zhangzhouensis: K0H63_04450
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Entry
K0H63_04450 CDS
T09194
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
szh
Shewanella zhangzhouensis
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
szh03400
]
K0H63_04450 (phrB)
Enzymes [BR:
szh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
K0H63_04450 (phrB)
DNA repair and recombination proteins [BR:
szh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
K0H63_04450 (phrB)
Prokaryotic type
K0H63_04450 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QYK06097
LinkDB
All DBs
Position
1037602..1039029
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AA seq
475 aa
AA seq
DB search
MNTLVWFRQDLRTIDNQALTRACEDANTRGGKVYALFIASPGQWQQHDMGVRQQRFLLAN
LNVLGEELARMGITLSLLKVDFFNQTAAALKAFCKENGISSIFAGAQIEIDERRRDQALL
DKGFPLNLTDEHCMLPPGSVVTQGQRDQGGAMYRVFTPFARRWREIAASRSLWPIPAPAP
VAAPVAFTPFAFWGEVDDDPALDKWPVGQEAALEKLSRFRELSMGRYGEQRDFPAIDGTS
SLSPYLALGVISPRQCLAALMEDFPDVFVNESSPGRTWLNELVWREFYRHLLVAFPGLSM
AKNFNALGDGIRWRNDETEFEAWKHGRTGYPLVDAAMRQLNQTGWMHNRLRMVVASFLTK
HLLIDWRWGERYFREQLIDGCLAANNGGWQWAAGTGCDAQPYFRIFNPMSQSEKFDPDAR
FIRKYLPEIAQWPTRSLHQASGPGLFDTSGYPPPIVEHSSARTRALDVMAVMKKG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaatacacttgtctggttcaggcaggatcttcgcaccatagataatcaggcgctgacc
cgggcgtgtgaggatgccaatacccgtggtggcaaggtttatgcgctctttatcgccagc
ccgggccagtggcaacagcatgacatgggggtgcgtcagcagcgctttttactggctaat
ctcaacgtgctgggtgaagagcttgcccgcatggggattacgctgtcattgctgaaggtg
gatttttttaaccaaaccgcggctgccctcaaggcgttttgtaaagaaaacggcatctcc
agcatcttcgccggggcgcaaatcgagattgatgagcgcaggcgcgatcaggcacttctg
gataaaggctttccgctgaatctgaccgatgaacattgcatgctgccccccggcagcgtg
gtcactcaggggcagcgggaccagggcggcgccatgtaccgggtatttactccatttgcc
cgtcgctggcgtgaaatagccgcttcccgctcgctttggcctatccctgcgcccgcgccc
gtggcagcgccggtggcattcacccccttcgcgttttggggagaggttgacgatgatccg
gctcttgataaatggcctgttggtcaggaggcggccctggaaaagttgtcccgctttcgg
gagctgtccatgggccgctacggtgagcagcgcgactttcctgccatcgatggcaccagc
agtctgtcaccctatctggcgcttggggtgatatccccccgtcagtgtctggcggcgctg
atggaagactttcccgacgtctttgtgaatgaatcctcgccgggccgcacctggctgaac
gagttggtgtggcgcgaattttaccgtcatctgctggtggctttcccgggcctcagcatg
gcgaagaactttaatgctctcggtgatggcattcgctggcgcaatgacgaaacagaattt
gaggcatggaaacacggccgcactggctatccgctggtggatgcggccatgaggcaactc
aatcaaaccggctggatgcacaatcgcctgcggatggtggttgccagctttctgaccaag
catctgcttatcgattggcgctggggtgagcgatattttcgcgagcaacttatcgatggc
tgccttgcggccaacaatggtggctggcagtgggccgccggtacaggttgtgatgcccag
ccttattttcggatctttaaccctatgagtcagtcggaaaaatttgatcccgacgctcgc
tttatccgtaagtacctaccagaaatagcgcagtggcccaccaggtcgctgcaccaggca
agtgggccggggctgtttgataccagcggctatccgcctccgattgttgagcacagcagc
gcccgtacaagggcgctggatgtgatggccgtgatgaagaagggttag
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