Shewanella zhangzhouensis: K0H63_04840
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Entry
K0H63_04840 CDS
T09194
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
szh
Shewanella zhangzhouensis
Pathway
szh02024
Quorum sensing
szh03060
Protein export
szh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
K0H63_04840 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
K0H63_04840 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K0H63_04840 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
szh02044
]
K0H63_04840 (ffh)
Enzymes [BR:
szh01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
K0H63_04840 (ffh)
Secretion system [BR:
szh02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
K0H63_04840 (ffh)
Eukaryotic Sec-SRP protein
K0H63_04840 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_24
AAA_33
T2SSE
KTI12
AAA_30
ABC_tran
YqeC
Helicase_RecD
AAA_31
Mg_chelatase
APS_kinase
AAA_14
TsaE
ATP_bind_1
AAA_16
KAP_NTPase
Rad17
AAA_28
6PF2K
ArsA_ATPase
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
QYK06167
LinkDB
All DBs
Position
1118684..1120057
Genome browser
AA seq
457 aa
AA seq
DB search
MFENLTDRLSRTLKTISGRGRLTEDNIKDTLREVRMALLEADVALPVVREFVNAVKERAV
GQEVAKSLTPGQVFVKIVQSELEKAMGEANEALNLAAQPPAVIMMAGLQGAGKTTSVAKL
SKFLRTRQKKSVLVVSADVYRPAAIKQLETLAKEVEVEFFPSDVSQKPIDIATAAISHAK
LKFIDVVILDTAGRLHVDEAMMDEIKALHAAVKPIETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEQVERGVDKEKAMKLASKVKSGGNFDLEDFREQLQQMKNMGGMMGLLEKLPGVGQL
PPEAMAQIQDGKMTRQMEAIINSMTPGERQNPDIIKGSRKRRIAAGSGTQIQDVNRLLKQ
FTQMQKMMKKMSSKGGMQKMMRAMGGMMPGGMKLPGR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacctgaccgacagactgtcgcgtacgctgaagactatcagcggtcgcggt
cgcttaacggaagacaacattaaagacaccctgcgggaagtccgtatggcgctccttgag
gccgacgtggccttgccggttgtccgtgaatttgtgaacgccgttaaagagcgcgcagtg
ggccaggaagtggccaagagcctgacgcccggccaggtgtttgtcaaaatcgttcaaagc
gagcttgaaaaggcgatgggcgaggccaacgaggccctgaatctcgccgcccagcctccg
gctgtgatcatgatggcaggtctgcagggtgcgggtaaaaccacctctgtggccaagctg
tccaagttcctgcgtacccgccagaaaaaatctgtactggtggtcagtgctgacgtatac
cgccctgcggcaattaagcagctcgaaaccctggccaaagaagtggaagtggaattcttc
ccttccgatgtgagccaaaagcccatcgacattgccactgcggctatttcacacgccaag
ctgaaattcatcgatgtggtgatcctcgataccgcaggccgcctgcacgtcgatgaagcc
atgatggatgaaatcaaggcgctgcatgcagcagttaagcccatcgaaaccctgttcgtg
gtagacgccatgacaggtcaggatgccgccaacaccgccaaggcctttaacgaggcgctg
ccgctgaccggtgtggtactgaccaaggtggacggtgatgcccgcggcggtgcggcgctg
tctatccgccacatcacaggtaagcctattaagttcctcggtgtcggcgaaaagaccgat
gcccttgagccattccaccctgaccgtgttgcctcgcgcatcctcggcatgggtgacgta
ctctccctgattgagcaggtagagcgcggcgtcgataaagaaaaagccatgaagctggcc
tccaaggtcaaatcgggtggcaatttcgaccttgaagacttccgcgagcagttgcagcag
atgaaaaatatgggtggcatgatgggcctgctggaaaaattgcccggcgtaggtcaactg
ccaccggaagccatggcacaaattcaggatggtaaaatgacccgtcaaatggaggctatt
attaactccatgaccccgggggaacgtcagaatcctgatatcatcaagggctcccgcaag
cgccgcattgcagcgggcagtggcacacaaattcaagacgttaaccgtctgcttaagcag
ttcacccagatgcagaagatgatgaagaagatgtcttccaagggtgggatgcagaaaatg
atgcgcgccatgggcggtatgatgcccggcggtatgaagcttcccgggcgttaa
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