Shewanella zhangzhouensis: K0H63_05240
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Entry
K0H63_05240 CDS
T09194
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
szh
Shewanella zhangzhouensis
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
szh03016
]
K0H63_05240 (truB)
Enzymes [BR:
szh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K0H63_05240 (truB)
Transfer RNA biogenesis [BR:
szh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K0H63_05240 (truB)
Prokaryotic type
K0H63_05240 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QYK06235
LinkDB
All DBs
Position
1205883..1206830
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AA seq
315 aa
AA seq
DB search
MARRTKGRNIDGIVLLDKPTGMSSNHALQRVKRIYNASKAGHTGALDPLATGMLPVCLGE
ATKFSQHLLDADKRYLVTAKLGQRTDTSDSDGEVVSERPLNFTQEQLDSALDSFRGDTLQ
VPSMFSALKYQGQPLYKYAREGKEVPREARPITVFELNFIKLEGDELTLDIHCSKGTYIR
TIIDDLGEKLGCGAHVIMLRRTAVAGYPYERMVTIEALEALLSQAEQEGVEPRTLLDPLL
LPMDTAVADFPEVNIPDAVAPYLMNGNPVRVAGVACDSLMRITLGEARRFVGVGAINEDG
LLAPKRLVVFYDDEA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgcaccaaagggcgcaatatcgacggtatcgtcctgctggacaagcccaca
ggcatgagttccaatcatgccctgcagcgggtcaagcgcatttacaatgcgtccaaagcc
ggccatacaggcgcgctcgatcctctggcgaccggcatgttgccagtgtgcctcggtgag
gcgaccaagttttcccagcacctgctggatgcggataagcgttatctggttaccgccaag
cttggtcagcgcactgacaccagtgattccgacggcgaagtggtcagcgaaagacccctg
aacttcactcaggagcaattggattcagccctggacagtttccgtggcgataccctgcag
gtaccttcgatgttttcggcgctcaagtatcagggccagcccctgtacaagtacgcccgt
gaaggtaaggaagtaccacgtgaagccaggcccatcacagtattcgagcttaactttatc
aagcttgaaggcgatgagctgacgttggatattcactgctccaagggtacctatatccgt
accatcatcgacgacctcggtgaaaagcttggctgtggcgcccatgtgattatgctcagg
cgtaccgctgtcgccggttatccttatgagcgcatggtgaccatcgaagctctcgaagca
ttgctctctcaggcagagcaggagggcgttgagccgaggaccttgctcgaccctctgttg
ctgccgatggatactgcggtggccgattttccggaggtcaatattccggatgcggttgcc
ccttatctgatgaacggaaacccggtgcgcgttgcaggtgtggcctgcgacagcctgatg
cgcattacccttggtgaggcccgacggtttgttggtgtgggtgccatcaatgaagatggc
ctgctggcgcccaagcgccttgttgtcttttacgatgatgaagcctaa
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