Shewanella zhangzhouensis: K0H63_05640
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Entry
K0H63_05640 CDS
T09194
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
szh
Shewanella zhangzhouensis
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
szh03021
]
K0H63_05640 (rpoS)
Transcription machinery [BR:
szh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K0H63_05640 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QYK06311
LinkDB
All DBs
Position
1303277..1304260
Genome browser
AA seq
327 aa
AA seq
DB search
MSLKNNTLVAEKLVDFSGKEADCDTNMDGEEVSLVQDLELEQQVQDDLQRNLDATQLYLS
EIGFSPLLTAEEEVYYSRKALRGCEKSRNRMIESNLRLVVKIARRYNNRGLALLDLIEEG
NLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRTAR
ELAHKLDHEPTAEEIAAKLNLPSVEVSRMLKLNEKITSVDVPLGGDNDKALLDVLPDDDS
VGPDYKVQDEDISNSVVNWLNELNTKQREVLARRFGLLGYEPSTLEDVGAEIGLTRERVR
QIQVEALKRLRDILSAQGLSVEALFRT
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgaaaaacaatacgcttgttgccgaaaagcttgtagatttttccggaaaagaa
gcagattgcgacaccaatatggacggtgaagaagtcagtctggttcaagacctggagctg
gaacagcaggttcaggacgatttacaacgtaaccttgatgctactcaactctatttgagt
gaaattggtttttcccctctgctgactgcagaagaagaagtttattattcccgcaaagca
ttgcgcggctgtgaaaagtcacgtaatcgcatgatcgaaagcaacctgcggctggtagtg
aaaatagcgcgtcgctacaacaatcgtggacttgctctgctcgacctaattgaagaaggt
aaccttggccttatccgggccgttgaaaagtttgatcctgagcgtggattccgtttctcg
acctatgccacttggtggatacgccagaccattgaacgggccatcatgaatcaaacccgc
accattcgtttgcccattcacgtggttaaagaactcaatgtgtatctgagaaccgcccgt
gaattggcgcataagctcgatcatgagcctaccgctgaggaaattgcggccaaactgaac
ctccccagcgttgaagtgagccgtatgctcaagctcaacgaaaaaattacttctgtggat
gtgcccctgggtggtgacaacgataaggcgctgttggatgtattacccgatgatgactct
gttggcccagactataaggtgcaggacgaggacatttcaaattcggtggtgaattggctc
aatgagctcaacaccaagcagcgggaagtgttggcacgtcgttttggtctgctcggttat
gagccatcaactctggaagatgtgggtgccgaaatcggtctgacccgtgagcgtgtaagg
caaattcaggtagaagcgcttaagcgtttaagagacattttgagtgctcaggggctgtcg
gtggaagccctgttcagaacctaa
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