Shewanella zhangzhouensis: K0H63_06875
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Entry
K0H63_06875 CDS
T09194
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
szh
Shewanella zhangzhouensis
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
szh03400
]
K0H63_06875
DNA repair and recombination proteins [BR:
szh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0H63_06875
Archaeal homologous recombinant proteins
K0H63_06875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
Transglut_prok
GTP_EFTU
Xlink
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QYK06530
LinkDB
All DBs
Position
1598293..1601355
Genome browser
AA seq
1020 aa
AA seq
DB search
MKPLTLSITAFGPFVDTQILDFRALGEWPLFLINGPTGAGKTTILDAICFALYGKTTGNE
REGTQMRCDAAPDDVLTEVTFEFGLGDKVYRVKRVPEQQRAKKNGEGFTVQKSDALLERI
EGDSATPLAAGKVTEVTAQIEDLLGLEVEQFRQVMVLPQGQFRKLLLADSKEREAIFGQL
FQTGIYKRIEDSLKQKALELKARAKELEARRAGILETAGAESVDALNDAMAALAPELARA
TEAKQTAEAKLAAAKAQREAAEAKLREFSALNDTRLRLEAENAKAESMAALGAQLERAAL
AESLAGTWHAWEEREKERQSAETAAATAEEAAKQAELSFANAKAAAAALPELDARRHQLK
NEAERLAEWRPRMHRLSVLNEAITGLGQALNAIDANLAQVRGRLGETQERMATLTQQRRD
LSALSSMAGSLEATLVQQTQVFERHQQLIEKERQAQKLATELSRLEADGRQAKANQDNLT
RARELLELAWHQGQAAMLAARLLPGAPCPVCGSAEHPSPAHHGGALPSDDELAAARESEQ
QAREMLSRARSEYKAQKQRLEVMQQELANDAATLGDALATSLEQKQHALGQSREACHNAK
AAQQSLQALERELEQLDNTQKQLLADIDGLQRQREQQSGELQKASGEQESLVGAMPELCQ
RLGNEQAFAAHLAVLSQEIDALSGQMEKLQTQLNDAQIRQTQCNERSQALQQTLSEARSR
EAAAKARFDTELGAKGFDDVVSFNQARMSTDDMGDAKNRIAGWQQLLAGLKERLAAQQEA
LGNALPPDLTELAALEAAVQDGFNQCNQQWQALNDTHVMYSRARAQLGTEAEVAARLDAE
YAVVGTLSDAASGMTGARISLQRFVLGVLLDDVLIEASERLHRMSKGRYRLLRREDKAKG
NRASGLDLEVEDAYTGKLRPVATLSGGESFMAALSLALGLSDVVQAYAGGIKLDTLFIDE
GFGSLDQDSLELAVRTLVDLQSSGRMIGVISHVTEMKEQIQTRVDIHKDTVGSQIRLTFA
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctttaaccctcagcatcaccgcctttggtcccttcgtggacacccaaatcctg
gactttcgtgcccttggagagtggcccttgttcctgattaacgggccgaccggagcgggg
aaaaccacgatcctcgatgcaatttgttttgcactttacggcaaaaccaccggcaatgag
cgcgaaggcactcagatgcgctgcgatgccgcccccgatgatgtgctgaccgaagtcacc
tttgaattcggtctgggtgacaaggtgtaccgggtgaaacgggtacccgagcagcagcgc
gccaaaaagaatggtgagggctttacggtgcaaaagagtgacgccctcttggagcgtatt
gaaggcgatagcgccactccgctcgcggccggcaaagttactgaggtcactgcgcagatt
gaagacctgttggggcttgaagtggagcagttccgccaggtcatggtgttgccccagggg
cagtttcgaaaactgcttttggccgactcaaaagagcgtgaggctatttttggccagctg
tttcaaaccggcatttacaagcgtatcgaagacagtctcaagcaaaaggcgctggagctt
aaagccagggccaaggagctcgaggcccgcagagcgggcattttggaaaccgcaggcgcc
gagagtgttgatgcgctgaatgatgccatggcagccttggcgccagagcttgcccgtgcc
accgaggcgaaacagactgccgaggcaaagcttgccgccgccaaagcacagcgtgaggct
gccgaggcaaagctgcgtgagtttagtgcccttaacgacaccaggctgcggttggaggcg
gaaaacgccaaagcggagtctatggctgcgcttggcgcgcagcttgagcgtgccgcactt
gccgaatccctggcgggtacctggcatgcgtgggaagagcgtgaaaaagagcgccagagt
gctgaaactgccgcagcgacggccgaagaggccgcgaaacaagcagaattaagttttgcc
aatgcaaaggccgccgccgccgctttgccagaattggacgccaggcggcatcaactgaaa
aacgaagccgagcgactggcagaatggcgcccgcggatgcaccggctgtcggtgctgaac
gaggctatcactggactcgggcaggcgcttaacgccattgacgccaatcttgcccaggtt
cgcggccgccttggtgaaacccaggagcgcatggcaactcttacccagcagcgacgagac
ttgtcagcgctgtcgagcatggcaggcagccttgaggccacactggtgcagcaaacccag
gtgtttgagcggcaccagcaattgattgagaaagagcgtcaggcgcaaaagctcgccacc
gagctttctcggctcgaagccgatggacgtcaggccaaggccaatcaggataatctgacc
cgtgcccgtgaactgctggaactcgcctggcatcaggggcaggcagccatgttggcggca
agactcttacccggcgcgccatgccctgtgtgcggcagcgcggagcacccaagtccagcc
caccatgggggggcactgccaagcgatgatgaacttgctgcggcaagagaatccgagcaa
caggcaagggaaatgctgagccgcgcccgctctgaatacaaagcgcagaagcagcgtctc
gaggttatgcagcaagagcttgccaatgacgctgccacgctcggtgacgcgcttgccacc
agtcttgagcaaaagcagcatgccctgggtcaaagccgcgaggcgtgccataacgcgaag
gccgcccaacaatcgctgcaggcgctggagagagagcttgagcagctcgataacacgcaa
aagcagctacttgcggatatcgatgggctgcagcgccagcgtgagcagcaatctggagag
cttcaaaaagccagcggtgagcaagaaagcctcgtcggtgccatgccggaactttgtcag
cgacttggaaatgagcaggcgtttgctgcccaccttgcggtgctttcccaggaaattgat
gccttaagcgggcaaatggaaaagctgcaaacccagctgaatgacgctcaaatccgtcaa
acccaatgcaatgagcgaagtcaggcgctgcagcaaaccctgagtgaagcccgcagccgt
gaagcggcagcgaaggcgcgctttgatactgagcttggggccaagggctttgatgatgtg
gtgagtttcaatcaggcgcggatgagcacagatgacatgggcgatgctaaaaaccgtatc
gccggctggcagcagctgttggctgggcttaaagagcgcctggctgcacagcaagaggcc
cttggtaatgcattgccaccggatctgactgagctggctgcccttgaagcggcagtgcag
gacggctttaaccaatgcaaccagcaatggcaggcgcttaacgatacccatgtgatgtat
agccgcgccagggcgcagcttggcaccgaagccgaggtcgccgccaggctcgatgcggaa
tatgccgtagtgggtaccttgtcggatgccgccagtggcatgacaggagcgagaataagc
ctgcagcggtttgtgctgggtgtactgctggacgatgtgctcatcgaggcgagcgagcgc
ctgcatcgcatgagcaaaggccgttaccgcttgcttcgccgcgaagataaggccaagggc
aaccgggcgtccggtttggatttggaagtggaggatgcctacaccggcaagttgcgcccc
gtggcaaccctaagtggcggcgaaagtttcatggccgctttgtcactggcgctgggctta
tcggatgtggttcaggcctatgcgggcggaattaagctcgacaccctctttatcgatgaa
ggctttggcagcctggatcaggactcgctggagcttgcggtgcgcaccctggtggacctg
caatcttcaggacgcatgataggggtgatatcccacgtgaccgagatgaaagagcaaatt
cagacccgggtcgacatccataaagacacagtaggcagtcagattcgcctcacattcgcg
tga
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