Shewanella zhangzhouensis: K0H63_07090
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Entry
K0H63_07090 CDS
T09194
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
szh
Shewanella zhangzhouensis
Pathway
szh03030
DNA replication
szh03430
Mismatch repair
szh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0H63_07090 (dnaX)
03430 Mismatch repair
K0H63_07090 (dnaX)
03440 Homologous recombination
K0H63_07090 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
szh03032
]
K0H63_07090 (dnaX)
03400 DNA repair and recombination proteins [BR:
szh03400
]
K0H63_07090 (dnaX)
Enzymes [BR:
szh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K0H63_07090 (dnaX)
DNA replication proteins [BR:
szh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K0H63_07090 (dnaX)
DNA repair and recombination proteins [BR:
szh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K0H63_07090 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
RuvB_N
AAA_5
AAA_14
ResIII
PIF1
TsaE
AAA_18
Adeno_E1B_55K_N
AAA_7
AAA_2
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
QYK06573
LinkDB
All DBs
Position
1636243..1639038
Genome browser
AA seq
931 aa
AA seq
DB search
MSYQVLARKWRPANFAEVVGQSHVLHALTNALGQQRLHHAYLFTGTRGVGKTSLARLFAK
GLNCEQGITATPCGQCSACREIAEGRFVDLIEVDAASRTKVDDTREILDNVQYRPSRGRF
KVYLIDEVHMLSKSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKALTQ
PQIQAQLAAVLSGEGLGFDEDALSLLAKAAAGSMRDALSLTDQAIAFGGGEVRLTQVQTM
LGAIDKGQILSLFDALCQGDIETLLTTARTALGFGADADEVLRALLELLHQISLAQFAPA
TASISDNGAAVLAWAKILKPEQVQLYYQILLSGRKDLPYAPDPASGLEMSLLRAVGFVPE
KPVSRWQSGEGLSAAEALKSVAPSTEEKSAPQADNAPKQAVITEQAPVAPVAPVAPVAPV
APVPGAGITAPVTGAESPVRATAEPTAKADSSVAAETALSGDDDVQEAESAALFAEQNVL
ISQAESQGFNPGYDSVNADNNDLPLHDAPPLFDEMAYADYPQSYSADISAPPVDRGLEDG
ADVQLSNASPQSVQPHSAHSQTDAGGAEAKVVAAQPDNASASAFGDDLLDAVLAAREDLL
SGITSEAKEDEAKKPVSSFERRRMAAQENSAVPVTAEPADTGEQDQTPPAAMSANTQAAA
RTQAEVSVSRADVAADDDRPPWETPVALAADDRSKAPGSALHEGSNRDSAPIETEARGKV
HPEEDTSAALQTQTPESLAVQSHTAQSQVAPQAKVETHEDELSSSDGQHTANVGAASRIC
GDETDLRWYKLMGALEIGGRVRQLAVNSVCLEWSNPIPLVLKQDQKHLAAPVAIAQLNEA
LSKALGHEAEIALEVGEVPGRETPLDIRARFHRELLSDARAALNTDPAVLRLMEQAGAWF
DDDSIGYPPELLAQRGRALPTPPALAQEPVV
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaggtgttggccagaaaatggcgccctgccaattttgccgaggtcgtgggc
caatcccacgtacttcatgccttgaccaatgccctcggtcagcaaagattacaccatgct
tacctttttaccggcacccggggtgtgggtaaaaccagtttggccaggctttttgccaag
gggctgaattgcgagcaggggatcactgccacaccctgtggccaatgcagtgcctgccgc
gagattgccgaaggccgctttgttgacctaatcgaagtggacgctgcatcccgtaccaag
gtggatgacacacgggaaatcctcgacaacgtacagtatcgccccagtcgcggccgtttt
aaggtgtacctcatcgacgaagtgcacatgctctccaaaagctcgttcaacgcgttactg
aagaccctcgaggaaccgcctgagcacgtaaaatttctgctcgccaccaccgacccgcaa
aaactgccggtgaccgtgctgtcccgctgcttgcaattcaatctcaaagcgcttacacag
ccccagattcaggcgcagttggctgcggttctcagcggcgagggcttgggattcgatgag
gatgccttatcgctgctcgccaaggcggcggccggcagtatgcgtgatgccctgagccta
accgaccaggcaattgcctttggtgggggagaagtgcgcctgacccaggtgcaaaccatg
cttggggccatagataaaggccaaatactgagtttattcgacgctctctgccagggagac
atcgagacactgctcaccacggctcgtaccgcactgggctttggcgccgatgccgatgag
gtattgagggcgttactggagctgctgcatcaaatcagtctcgcccaatttgccccggcc
acagccagcatcagtgacaacggcgccgcggtacttgcctgggccaaaatattgaagcct
gagcaggtgcagctttattaccaaatattgctcagcggccgtaaagatttgccttacgct
cccgacccggcgtccgggctggaaatgagtctgcttcgcgccgtgggctttgtgcccgaa
aagccggtaagccgttggcagtcaggtgagggcctgtcggctgctgaggcgctcaagtct
gtcgcgccatcgacagaagaaaagagtgcacctcaagcggacaacgcgcctaagcaagct
gttatcactgagcaggctccagtggctccagtggctccagtggctccagtggctccagtg
gctccagtgccgggtgcgggtattacagctccggtgacaggtgccgaaagcccggtcagg
gcgactgcggagccaacagccaaggctgacagttcggttgccgccgaaacggcactgagc
ggcgatgacgatgtacaggaggccgagtctgccgccctgtttgctgagcaaaacgtgctg
atttcccaggccgagagccagggtttcaatcccgggtacgactcagtaaacgccgataac
aacgacctcccgttacatgatgctccaccattatttgatgaaatggcgtatgcggactat
ccgcaaagctattcggccgatatctctgcgccccctgtggacagagggcttgaagatggc
gctgacgttcagctctccaatgcttcgccccaaagcgtgcagccccacagcgctcattct
caaacagatgctgggggggccgaggcaaaggtcgtggcagcacaacctgataacgcctcg
gcttctgcgtttggtgatgacctgctcgatgccgttttggctgccagagaagatttactc
agtggtatcacctcggaggcgaaagaggatgaggcaaaaaagccggtatccagtttcgag
cgccgccgcatggcggcgcaggaaaatagtgccgtcccggtaactgcagagccggcagac
acgggcgagcaggaccaaactccacccgctgccatgtcagccaacacccaagcggctgcg
cgtacccaagccgaagtcagtgtatcgcgtgctgatgtggcggccgatgacgacaggccg
ccctgggaaaccccggtagcacttgctgctgatgacaggtcaaaagcgccgggatcagcc
cttcatgagggttcaaacagagactcagcgccgattgagaccgaggcgcgaggtaaggtt
cacccagaggaagacacatcggctgcgctgcaaacgcagacacccgagtctctcgctgta
cagtctcacacagcacaatctcaagtagcaccgcaggctaaagtggaaacacacgaggac
gaactctcgtccagcgacgggcagcatactgccaatgtcggtgcagccagtcgcatttgc
ggtgacgaaactgaccttcgctggtacaagctgatgggagcgctggagattggcggacgg
gttcgccagttggcggtcaattcggtgtgcctggaatggtctaatcccatccctcttgtg
ctgaaacaggaccaaaagcatctggctgcgcctgtggctattgcgcagctcaatgaggcg
ctgtccaaagccctaggtcacgaggctgaaatcgcattggaggtgggtgaggtcccggga
cgggaaaccccgctggatatccgtgcccgttttcaccgtgagctgctgagtgatgccaga
gcggcgctcaataccgatcccgctgtgctgagactcatggagcaggccggcgcctggttt
gatgacgacagcattggctatccgccagaactgctggcccagcggggcagggccctgcca
acgccaccggctttggctcaggagcctgtggtctga
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