Shewanella zhangzhouensis: K0H63_08625
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Entry
K0H63_08625 CDS
T09194
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
szh
Shewanella zhangzhouensis
Pathway
szh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K0H63_08625 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
szh03400
]
K0H63_08625 (uvrC)
DNA repair and recombination proteins [BR:
szh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K0H63_08625 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
HHH
HHH_5
GIY-YIG
UVR
HHH_2
HHH_3
DNA_photolyase
GIY_YIG_2
MciZ
Motif
Other DBs
NCBI-ProteinID:
QYK06847
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Position
2007287..2009107
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AA seq
606 aa
AA seq
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MFDHKAFLKTVSSASGVYRMYDASAEVIYVGKAKDLKKRLSSYFRTNLPNIKTQALVSNI
ANIDVTVTHSETEALILENDYIKQYMPKYNVLLRDDKSYPYILLSGHKHPRLAYHRGAQR
EKGEYFGPYPNGGAVRESLNLMQKLFPIRQCEDAYYRARSRPCLQYQIGRCSAPCVGKIS
DEDYDEQVRLATLFLRGKDQQVIASLVSKMEAAALAMEYEAAARYRDQIQALRKVAEQQN
VSGQQGDMDVIGVNYASGIACFHILFIREGKIFGSRSYFPAVPDATELGEVLRAFMLQFY
LGNEAHRSIPKEVLLGEDFEDLHELEAAMQDSLGHRLEIKTKVRAERAAFLRLANTNAAN
AVVTKLAHKSTVEQRMELLEEVLGLGAPIQRMECFDISHTMGESTVASCVVFNREGPNKG
EYRRYNISGITGGDDYAAMAQALSRRFDKIERTGKVPDVLFIDGGLGQLRAAMAIVNDKF
AELDRQPLLVGVAKGESRKPGLETLIFGGSEAEFSLESDNPALHLIQHIRDESHRFAITG
HRAKRQQTRNTSSLESIPGIGPKRRKALLQYLGGLQQVKNASVAELAKVPGISAEMAQTI
HDALRG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgaccataaagcctttttaaaaacggtttccagtgccagtggcgtctaccgcatg
tatgacgcctcggcagaggttatctatgtaggaaaggcaaaagatctgaaaaagcggctg
tcgtcctatttcaggacgaatctgcccaatattaagacccaggctttggtgtccaacatc
gccaacatcgatgtcaccgttacccacagtgagaccgaagcgctaatcctggaaaatgat
tacatcaagcagtacatgcccaaatacaatgtgctgcttcgcgacgataaatcctacccc
tatattttgctcagtggccataagcaccccagactggcctaccacagaggtgcccagcgg
gagaaaggcgagtactttgggccgtaccccaatggcggcgcggtgcgtgaaagcctcaat
ctgatgcaaaagctgtttcccatccgccagtgtgaagatgcttactaccgcgcccgctct
cgtccctgcctgcagtatcagattggccgctgctcggcgccatgtgtcggcaaaatttcc
gatgaggactacgacgagcaggtaaggctggcaaccctgttcctcagaggcaaagaccaa
caggttatcgccagtttggtcagcaaaatggaagctgctgcactggccatggaatacgag
gcagcagcgcgctatcgcgaccaaattcaggcgctgcgcaaggttgccgagcagcaaaat
gtctcaggacagcagggtgatatggatgttatcggggtgaattacgcctcgggtattgcc
tgtttccatatcctgtttatccgtgaaggcaagatttttggcagccgcagttattttcct
gcggtgccagatgccactgagcttggagaagtgttgcgtgcctttatgctgcaattctat
ttgggcaatgaggcgcaccgcagcattccaaaggaagtcttgcttggggaggactttgaa
gacttgcatgagctcgaagccgccatgcaggattcactgggtcaccggcttgaaatcaaa
accaaggtgagggcggagcgggctgcgtttttgcgcctggccaataccaatgctgccaat
gccgttgtgaccaagctggcccacaagagcacggttgagcaacgtatggagctcctggag
gaagtgctgggtcttggcgcgcccatacaacgcatggagtgttttgatatcagccacacc
atgggagaaagcaccgttgcttcctgcgtggtctttaaccgtgaaggccccaataagggt
gaataccgtcgctacaacatcagcggcatcactggtggtgacgactacgcggccatggct
caggcgctttcccgtcggtttgataagattgaacgaaccgggaaggtgcctgacgtgctc
tttatcgacggtggcctggggcaactgcgagcagccatggcgatagtcaacgacaagttt
gccgagcttgaccggcagccgctgcttgttggggtagccaaaggggaaagccgcaaaccc
gggctcgagaccctcatttttggtggcagcgaagccgaattttctctggagtccgataat
ccggcgctgcacctcattcagcatattcgagatgagtcccaccgttttgccattactggc
cacagggcgaaaaggcagcaaaccagaaatacctcgtccctcgagtcaattcccgggatt
ggtcctaaacgtcgcaaggcactgctgcaatatctcggcggattacagcaagttaaaaat
gccagtgtcgccgagcttgccaaggtgcccgggatcagcgcagaaatggcgcaaactatc
cacgacgcattgcgggggtga
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