Shewanella zhangzhouensis: K0H63_09300
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Entry
K0H63_09300 CDS
T09194
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
szh
Shewanella zhangzhouensis
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
szh03032
]
K0H63_09300 (gyrA)
03400 DNA repair and recombination proteins [BR:
szh03400
]
K0H63_09300 (gyrA)
Enzymes [BR:
szh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K0H63_09300 (gyrA)
DNA replication proteins [BR:
szh03032
]
Prokaryotic type
DNA Topoisomerases
K0H63_09300 (gyrA)
DNA repair and recombination proteins [BR:
szh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K0H63_09300 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
PUA_4
Motif
Other DBs
NCBI-ProteinID:
QYK07151
LinkDB
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Position
2161454..2164159
Genome browser
AA seq
901 aa
AA seq
DB search
MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDAAAAM
RYTEIRMEKLAHELLADLDKETVDFVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVVKGCLALIEEPELSIEQLMEYIPGPDFPTAAIINGKKGIEEAYRTGRGKA
IMRARAEVETEDNGRERIIVTEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDGM
RIVVEIKRGEVGEVVLNNLYAQTQMQSSFGINMVALANGQPKLFNLKEMLEAFILHRREV
VTRRTVYELRKARDRAHILEALAVALANIDPIIALIKASASPSDAKAGLIAKGWELGTVK
AMLEKAGDDAARPEWLEPEFGIRDGLYFMTEPQAQAILDLRLHKLTGLEHEKILQEYEEL
LEIIAGLLHILRSPERLMEVIKEELELILEQFGDNRRTEINASAVDISLEDLINEEDVVV
TLSHLGYAKYQPLTDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKLYW
LKVYQLPLASRQARGRPIVNLLPLQEGERITAILPVREYEEGKYILMATSHGTVKKTALT
EYSRPRSNGIIAVNLKDGDQLIGVDITDGSSEIMLFSDAGKVVRFKEGEEVAVVDENGNP
VLDEEGKPQINFKGVRPMGRGATGVRGIALEDGQRVVSLIVPKDDSAILTVTANGFGKRT
ELAEYPAKSRATKGVVSIKVTERNGPVVGAVQVGENDEIMLISDKGTLVRTPANGVSIIG
RNTQGVTIIRTADDEQVVGLQRIDEIQDDGSEYLEEDVEGAEGDIIAEADTQPTDDANDE
A
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttggcttcatctatttcgccaattaacatcgaagacgaactcaagaattcg
tacctggattacgccatgagcgtgatcgtgggacgggcactgccggatgtgcgtgacggc
cttaagcctgtgcatcgccgtgtgctgttcgcgatgaacgaacttaaaaacgactggaac
aagccttataagaagtcggcacgtgtggtcggtgacgttatcggtaaataccaccctcat
ggcgatagcgctgtgtacgacaccatagtgcgtatggcccagccgttctcgttgcgttac
accctggtagacggtcagggtaacttcggttctatcgacggcgacgccgcagcagcaatg
cgttacaccgaaatccgcatggaaaagctggctcacgagctgctggctgatctggataaa
gaaacggtagatttcgtgcccaactacgacggtaccgaacaaattcctgccgttctgcct
accaagattcctaacctgctggtgaacggttcatccggtatcgccgtgggtatggccacc
aatattccgccccacaacctgaccgaagtggttaaaggttgtttggcgctgattgaagag
cctgaactatccatcgagcagttgatggagtacatcccgggccctgacttcccgacggcc
gccattatcaatggcaaaaaaggcattgaagaagcctatcgtaccggtcgcggcaaggcc
atcatgcgtgcccgcgccgaagtcgaaaccgaagacaacggccgtgagcgcattattgtc
accgagatcccgtatcaggtgaacaaggcccgtttgattgaaaaaatcgccgagctggta
aaagacaagaagattgaaggcatcagcggtctgcgtgatgagtccgacaaggacggcatg
cgtatcgtggtggaaatcaagcgcggtgaagtaggcgaagtggttctgaacaacctctac
gcccaaacccagatgcagtcttccttcggtatcaacatggtggcactggccaatggtcag
ccaaagctgtttaacctcaaggagatgctggaagcctttattctgcaccgccgtgaagtg
gttacccgccgcaccgtgtatgaactgcgtaaggcccgcgaccgcgcccacattctggaa
gcgctggcggttgcccttgccaatatcgaccccatcattgcccttatcaaggcctctgcc
agtccatccgacgccaaggcaggcctgattgccaagggttgggagctcggcacagtaaaa
gccatgctggagaaggccggtgacgacgccgcccgtccagagtggctggagccagagttt
ggtattcgcgacggtctgtactttatgactgagccacaggcccaggcgattctggacctg
cgtctgcacaagctgactggtcttgagcacgagaagatcctgcaggaatacgaagagctg
ctggaaatcattgccggtttgctccacatcctcagaagcccagagcgtctgatggaagtc
atcaaagaagaacttgagcttattcttgagcagtttggcgataaccgccgcactgaaatc
aacgcctctgccgtggacatcagcctcgaagatctgattaacgaagaagacgtggtagtg
accctgtcgcacctcggctacgccaagtatcagccgctgaccgactaccaggcccagcgc
cgtggtggtaagggtaaggccgcgaccaaggtgaaagacgaagatttcgttgaaaaactg
ctcgttgccaacacccacgataccattttgtgcttctctgacttcggtaagctctactgg
cttaaggtataccagttgcctctggcaagccgtcaggcccgtggtcgcccaatcgttaac
ctgctgccattgcaggaaggtgagcgcattaccgcgattctgccggtgcgtgaatacgaa
gaaggcaagtacatcctgatggctacctctcacggtaccgtgaagaagacggccctgacc
gagtacagccgtccacgttccaacggtattattgctgtgaacctcaaagacggcgatcag
ctgattggcgtggatattactgacggcagcagcgaaatcatgctgttctctgacgccggt
aaagtggtgcgcttcaaagaaggcgaagaagttgctgtagttgatgaaaacggcaaccct
gtgctggatgaagaaggcaagccgcaaatcaacttcaagggcgtgcgccccatgggccgt
ggtgccacaggtgttcgtggtattgccctggaagatggtcaacgtgtggtgtcgctgatt
gtaccgaaagacgacagcgccattctgactgtgactgccaacggctttggtaagcgtacc
gagcttgctgaatacccagccaagagccgtgccaccaagggtgtggtatccatcaaggtc
accgagcgtaacggccctgtggtaggcgccgtgcaggtgggcgagaacgatgaaatcatg
ctcatcagcgacaagggtacactggtgcgtacccctgccaacggtgtgtctatcatcggc
cgtaacacccagggcgtgaccatcatccgtaccgcggatgacgagcaggttgttggtctg
cagcgcatcgatgaaatacaggatgacggcagcgaatatctggaagaggatgttgaaggc
gccgaaggcgacatcatcgccgaagctgatacacagccgacagacgatgccaacgacgag
gcataa
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