Shewanella zhangzhouensis: K0H63_10330
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Entry
K0H63_10330 CDS
T09194
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
szh
Shewanella zhangzhouensis
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
szh03016
]
K0H63_10330 (cmoB)
Transfer RNA biogenesis [BR:
szh03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
K0H63_10330 (cmoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_23
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_31
CMAS
PrmA
PCMT
Motif
Other DBs
NCBI-ProteinID:
QYK03511
LinkDB
All DBs
Position
2374762..2375754
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AA seq
330 aa
AA seq
DB search
MISFSSFYRQIADTQLQHWLESLPAILGEWQRQHKHGNLPKWEKVLAKLHYPAPEFLDLK
DSVTIGDGQQLDSGQTEKLENLLRILQPWRKGPFHVHGIHIDTEWRSDWKWDRVAPHISP
LTNRTVLDVGCGSGYHMWRMLGAGAKRVVGIDPSALFLCQFEAIKRLIDTELPVHLLPLG
IEELPPLDAFDTVFSMGVLYHRRSPIDHLLQLRDQLRMGGELVLETLVVDGDKDTVLVPQ
DRYGKMNNVWFLPSIDALKLWLEKCDFTDVRCVNVDVTSLAEQRSTPWMQNKSLVDYLDP
KDINLTVEGYPAPKRATFIAVKNRSPQDAD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgatcagtttctcaagtttttatcgccaaatcgccgatactcaattgcaacactggctc
gagtctttgcccgctattctgggtgagtggcaacgccagcataaacacggcaacctgccc
aaatgggaaaaggtgctggcaaagctgcactatccggcccctgaattccttgatttgaaa
gacagcgtgactattggcgacgggcagcaactcgacagcggccaaaccgagaaactggaa
aacctgctcaggattctacagccctggcgcaagggccccttccatgtgcatggcattcac
atcgataccgagtggcgcagcgactggaaatgggacagggttgctccccatatcagccct
ctgaccaatcgcactgtactggacgtgggttgtggcagtggctatcacatgtggcgcatg
ctgggggccggagccaaacgggtggtaggcatagacccatcggcactgtttctgtgccaa
tttgaagccattaagcgcctgatagataccgagctgccagtacacctcttgcctctgggc
atagaggagctgccgccactggatgccttcgatactgtgttctccatgggcgtgctctat
caccgacgttcccccatcgatcacttgttacaacttagggatcaattgcgaatgggtggt
gaacttgtgttggaaaccttggtggtagatggcgataaagacacggttctggtgccgcaa
gatagatatggcaagatgaataatgtatggtttttaccatcaattgatgcacttaagctg
tggcttgagaaatgtgattttaccgatgtgcgctgtgtgaatgtggatgtgacctccctt
gcggagcagcgcagtaccccatggatgcaaaacaaatcgcttgtggattatctggatccc
aaggacatcaacctcacagtagaaggttatccggcacccaaacgggctaccttcatcgcg
gtaaagaaccgcagtccacaggatgcagactga
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