Shewanella zhangzhouensis: K0H63_12020
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Entry
K0H63_12020 CDS
T09194
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
szh
Shewanella zhangzhouensis
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
szh03016
]
K0H63_12020 (truA)
Enzymes [BR:
szh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
K0H63_12020 (truA)
Transfer RNA biogenesis [BR:
szh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K0H63_12020 (truA)
Prokaryotic type
K0H63_12020 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QYK03825
LinkDB
All DBs
Position
complement(2760795..2761580)
Genome browser
AA seq
261 aa
AA seq
DB search
MRIALGIEYDGSKFYGWQRQAEVNSVQAELERALSIVANEPIEVQCAGRTDAGVHATGQV
VHFDTNAVRKEGAWTLGVNVHLPDDIAVRWAMPVSDDFHARFSATARRYRYVIFNHNFRP
GILRKGVSHYHGDIDVERMHDAAQALIGERDFTSFRAIGCQSNTPFRNVHKVSVSRHGMY
IVVDIQANAFLHHMVRNIVGSLLEIGLGNQPLDWMATLLEVKDRSQAAATAKPHGLYLVD
VTYPESFGLPKLSLGPLFMPD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgctcttgggattgaatacgacggcagcaagttttatggctggcagcgccag
gccgaggtgaactcggttcaggcagagcttgagagggcgctgtccatcgtcgccaacgag
cccatcgaggtgcagtgtgcgggtcgtaccgacgcaggggtacacgccacaggccaggta
gtgcatttcgataccaacgccgtcagaaaagaaggcgcctggacgctgggagtgaacgtt
cacctgcctgatgatatcgcagtgcgctgggccatgccggtgagcgatgatttccatgcc
cgtttttctgccactgcccgccgttatcgttacgttatcttcaatcacaatttccgtccc
ggcattttgcgcaagggcgtgagccattatcacggtgatattgacgtggagcggatgcac
gatgccgctcaggcgctgatcggtgagcgggactttaccagttttcgcgccattggctgc
cagtccaatacgccgtttcgcaatgtccacaaggtgagcgtaagccgtcatggcatgtat
atcgtggtcgacattcaggccaatgcctttttgcaccatatggtgcgcaatatcgtcggc
tccctgctggaaatcggccttggcaaccaaccacttgactggatggcgaccttgcttgag
gtcaaagacagaagccaggccgctgccaccgccaagccccacggactttatttggtagat
gtgacttacccggagagttttggtttgcccaagctgtccctcggtccgctttttatgcca
gactga
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