Shewanella zhangzhouensis: K0H63_12715
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Entry
K0H63_12715 CDS
T09194
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
szh
Shewanella zhangzhouensis
Pathway
szh02020
Two-component system
szh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K0H63_12715
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K0H63_12715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
szh03021
]
K0H63_12715
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
szh02035
]
K0H63_12715
Transcription machinery [BR:
szh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K0H63_12715
Bacterial motility proteins [BR:
szh02035
]
Flagellar system
Flagellar assembly proteins
Stator
K0H63_12715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
CT_C_D
DUF3263
TY-Chap3
DUF1390
Motif
Other DBs
NCBI-ProteinID:
QYK03943
LinkDB
All DBs
Position
complement(2908865..2909584)
Genome browser
AA seq
239 aa
AA seq
DB search
MNKAAAYTSMESKTSIVEQYAPLVKRIAHHMLARLPASVQLDDLLQAGMIGLLEASAKFD
GGKGAKFETFAGIRIRGAMLDEIRKGDWVPRSVHRNQRRVAQVIDELEQELGRDARDTEI
AERLDMSMEEYHHILNDVSVGKIIGIEDLGVSHDVLVPDGEQTNDIYDDLAQNQFQQALA
DAIRQLPERDALVLSLYYDEALNLKEIGAILDVSESRVCQIHSQAMLRLKGKLKHWTQV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagccgcggcgtatacctccatggagagtaaaacctccatcgttgaacagtac
gcaccgctggttaaaagaatcgcgcaccacatgttggccagattgccggcatccgtacag
ttggacgacttgctgcaggcgggcatgattggcctgctcgaggcttcggccaaatttgac
ggcggcaaaggcgccaagtttgaaacctttgctggcattcgaattcgtggtgccatgctg
gatgaaatccgtaaaggtgattgggttccacgttctgttcatcgtaatcagcgcagagtc
gcccaggtgatagacgaactggaacaagagctcggacgtgatgcccgggacacagaaatt
gccgaaagacttgatatgtcgatggaggaataccatcatatcctcaatgatgtttctgtt
ggtaaaatcatagggatagaagatttaggcgtatcacacgatgttctggttcccgacggg
gaacaaaccaacgacatttatgatgacctggctcagaaccagttccagcaggctttggca
gatgccattcgccagttacccgagcgggacgcgctggtgttatcactttattacgatgaa
gcactgaatttaaaagaaataggcgccattcttgatgtgagtgagtcgcgggtatgccag
atccacagtcaggcgatgctcaggctcaaaggtaagctcaagcattggacacaagtataa
DBGET
integrated database retrieval system
