Shewanella zhangzhouensis: K0H63_14335
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Entry
K0H63_14335 CDS
T09194
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
szh
Shewanella zhangzhouensis
Pathway
szh03030
DNA replication
szh03430
Mismatch repair
szh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0H63_14335 (holA)
03430 Mismatch repair
K0H63_14335 (holA)
03440 Homologous recombination
K0H63_14335 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
szh03032
]
K0H63_14335 (holA)
03400 DNA repair and recombination proteins [BR:
szh03400
]
K0H63_14335 (holA)
Enzymes [BR:
szh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K0H63_14335 (holA)
DNA replication proteins [BR:
szh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K0H63_14335 (holA)
DNA repair and recombination proteins [BR:
szh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K0H63_14335 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
KaiA_N
Motif
Other DBs
NCBI-ProteinID:
QYK04245
LinkDB
All DBs
Position
3277645..3278673
Genome browser
AA seq
342 aa
AA seq
DB search
MRVYPEQLGRHLTPLAQCYCLFGDDAWLIENARSQLLMAARQQGFEERISLEQDNGFNWH
DLQNEWQALSLFASRRIIELTLPQAKPGADGSAMLTSLMAQPNPDLLLILRGPKLAAEQT
NSKWFKTLDNAGVYVPCNTPEGQQFFRWLDGRIAANRLMLDGDARQLLATLYEGNLLAAE
QAVQLLALLAANRRISAEELSQYFDDQSRFNVFQLSDALLGNQQQRVAHILAQLKAEGTA
LPIVLWAVFRELASLLQLKTAMVQRESLAPMWSRLRIWDKRKPLYEAALSRLSLPQIEAM
LALSSSLELKLKQGGEEDWTLLTHLCLLFDAAAHSALVDTRG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtttatcctgagcagctgggccgccacctgacaccgctggcccaatgttactgt
ttgttcggtgacgatgcctggttgatagaaaacgcccgctctcagttattgatggccgca
aggcagcaaggatttgaagagcgtatcagccttgagcaggataacggcttcaactggcac
gacttgcaaaacgagtggcaggccttaagcctctttgccagccgccgcattatcgaactc
accctgccccaggccaaacccggcgccgatggcagcgccatgctgacgagcctgatggcg
cagcctaacccagacctgctgcttatcctgcgcggtcccaaactcgccgccgagcaaacc
aacagcaaatggtttaaaaccctcgacaacgccggtgtctatgttccctgcaatacacct
gaagggcagcaatttttccgctggttagatggccgcattgccgccaaccgattgatgctg
gacggtgacgcgcgccaattactggcaaccctgtacgaaggtaacctgctggccgctgag
caggcggtacaactactggcgctgcttgcagccaaccgacggatcagcgccgaagaactg
agccagtatttcgacgaccaatcccgcttcaacgtgtttcagctcagtgatgccctgctt
ggaaaccaacagcagcgcgtggcccatatattggcccagctcaaggctgaaggcacagcc
ctgcccattgtgctctgggccgtgtttcgcgaacttgcgagtctgctgcaattgaaaaca
gccatggtacaaagggaatccttggcaccaatgtggtcaaggctgcggatttgggacaag
cgcaagccgctctatgaggccgcactgtcgcggctgtcactgccacagattgaagccatg
ctcgccctctcatcctcactggagcttaagcttaaacagggcggagaagaggactggaca
ctgctgactcacctttgcctgctgtttgatgccgctgcccacagtgctctggtggatacc
cggggctga
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