KEGG   Shewanella zhangzhouensis: K0H63_16575
Entry
K0H63_16575       CDS       T09194                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
szh  Shewanella zhangzhouensis
Pathway
szh02024  Quorum sensing
szh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:szh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    K0H63_16575 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    K0H63_16575 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:szh03019]
    K0H63_16575 (hfq)
   03036 Chromosome and associated proteins [BR:szh03036]
    K0H63_16575 (hfq)
Messenger RNA biogenesis [BR:szh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     K0H63_16575 (hfq)
Chromosome and associated proteins [BR:szh03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    K0H63_16575 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1 DUF7327
Other DBs
NCBI-ProteinID: QYK04655
LinkDB
Position
complement(3774513..3774785)
AA seq 90 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPFNVGSHQGGSNYNAQQDDSAGEQ
NT seq 273 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttacaagacccatttttgaacgcactgcgccgtgagcgtgtt
cccgtttctatttatttggttaacggcatcaagcttcagggacaggttgagtctttcgac
cagttcgtgatcctgctgaaaaacactgtaagccagatggtttacaagcacgccatttct
accgttgttccatcccgtccattcaacgtgggcagtcatcagggtggcagcaactacaat
gcccaacaagacgacagtgccggcgagcagtaa

DBGET integrated database retrieval system