Shewanella zhangzhouensis: K0H63_16640
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Entry
K0H63_16640 CDS
T09194
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
szh
Shewanella zhangzhouensis
Pathway
szh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
szh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
K0H63_16640 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
szh03019
]
K0H63_16640 (orn)
03009 Ribosome biogenesis [BR:
szh03009
]
K0H63_16640 (orn)
Messenger RNA biogenesis [BR:
szh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K0H63_16640 (orn)
Ribosome biogenesis [BR:
szh03009
]
Eukaryotic type
Pre-60S particles
RNases
K0H63_16640 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QYK04662
LinkDB
All DBs
Position
complement(3783099..3783644)
Genome browser
AA seq
181 aa
AA seq
DB search
MAADAKNLIWIDLEMTGLEPEVDRILEIATLVTDQDLNILAQGPVIAIHQSDEVLAAMDD
WNQQHHGASGLIERVRSSQYTEADAIAQTIDFLLLHVPKGVSPMCGNSVGQDRRFLNKYM
RELEDFFHYRNIDVSTIKELVKRWDPEVMKGFKKQGTHQALLDIQESIAELQFYRDKVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacgcaaaaaatcttatttggattgatcttgagatgacaggattggagcct
gaagtggaccggatcctggagattgccaccctggtaaccgatcaggacctgaacatcctg
gcccaggggcctgtgatagctattcatcagtctgacgaggttttggcagccatggatgat
tggaaccagcagcaccacggtgcctcaggtctgatagaacgtgtacgaagcagccaatac
acagaagctgacgccattgcccagacaattgatttcctgttgttgcatgtccccaagggc
gtttcacctatgtgcggcaacagcgtagggcaggacagacgtttcctgaacaagtacatg
cgcgaactggaagattttttccactacagaaatatcgatgtcagcactatcaaagagttg
gtaaaacgctgggatcctgaagtgatgaaaggcttcaagaaacaaggcacccaccaggcg
ctgcttgatatccaagagtccattgccgaactgcagttctatcgcgacaaagtatttaaa
atttga
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